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Heatmap: Cluster_72 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
0.17 -0.11 0.09 0.0 -0.2 -0.03 -0.11 -0.04 -0.07 0.06 0.18 -0.0
-0.07 -1.14 -0.31 -1.81 -0.87 0.33 0.29 0.34 0.75 0.49 -0.43 0.47
0.32 0.23 -0.26 -0.05 -0.08 -0.47 -0.16 0.11 0.21 -0.45 0.15 0.19
0.2 -0.16 -0.47 -0.11 -0.46 -0.31 -0.05 0.3 -0.04 0.11 0.36 0.32
- 0.97 - -0.57 -1.61 -0.01 -0.2 -1.79 -2.06 -1.88 1.59 1.75
0.06 -0.04 -0.13 -0.04 0.02 -0.08 0.03 0.14 -0.09 -0.08 0.08 0.1
- 0.06 -0.02 - - - - 1.31 - 0.2 1.93 1.34
0.45 -0.34 -1.6 -0.44 -1.15 - 1.02 0.64 0.75 0.22 -0.53 0.25
0.33 0.04 -0.05 -0.39 -0.34 0.04 -0.41 -0.25 -0.01 -0.24 0.42 0.48
-0.15 -0.12 -0.06 -0.04 0.07 -0.18 -0.01 0.21 0.01 -0.03 0.03 0.21
0.5 0.34 -0.56 0.14 -0.69 -0.43 0.67 0.75 -1.54 -0.92 -0.12 0.16
- 1.1 -0.22 1.44 - - - - 0.81 - 2.18 -
- - -0.36 0.49 - - 0.45 1.42 -1.37 - 1.64 1.19
- - - - - - - - - - - 3.58
0.02 -0.26 -0.18 0.02 0.1 -0.0 0.14 0.24 -0.02 0.1 -0.11 -0.12
-0.13 0.0 -0.13 -0.16 -0.02 0.01 -0.06 0.23 0.08 -0.01 -0.04 0.16
-0.0 -0.12 -0.16 0.01 0.16 -0.13 -0.48 0.02 0.14 -0.1 0.21 0.3
0.07 0.04 -0.12 0.11 -0.17 -0.25 -0.15 0.12 0.09 0.1 -0.04 0.14
- - - - - - - - - - - 3.58
0.01 0.09 -0.04 -0.08 0.12 -0.2 -0.07 0.08 -0.03 0.04 -0.04 0.09
0.63 -0.23 -0.1 -0.4 -0.57 -0.85 -0.23 0.42 0.18 0.14 0.21 0.15
0.14 0.17 0.09 -0.1 0.0 -0.31 -0.36 -0.01 -0.08 0.22 0.0 0.11
0.06 -0.12 -0.08 0.02 0.04 0.13 -0.11 -0.03 0.02 0.07 0.15 -0.18
0.12 -0.3 0.08 -0.11 0.01 -0.03 -0.16 0.0 0.04 -0.14 0.22 0.18
- - - - - - - - - - 1.77 3.1
-1.02 -0.74 0.35 0.18 -0.15 0.4 0.08 0.11 0.38 -0.18 -0.24 0.14
0.02 -0.24 -0.27 -0.01 0.39 -0.48 0.27 0.04 -0.24 -0.06 0.11 0.21
- - - - - - - - - 2.62 - 2.55
- - -2.09 - -0.5 0.44 - 1.16 0.96 0.74 -0.02 1.52
- - - 1.99 - - - - - - 2.11 1.89
- - - - - - - - 1.82 2.11 - 2.05
-0.04 0.13 0.02 0.02 -0.51 0.05 -0.06 -0.08 0.12 -0.05 0.11 0.19
0.08 -1.01 - 0.21 -1.91 - 0.11 0.27 - -0.69 1.72 1.49
0.18 -0.29 -1.38 -0.26 -1.46 0.18 0.29 0.24 0.25 0.28 0.11 0.54
0.24 - - - 0.84 - -0.31 - 2.24 -0.6 - 1.5
-0.09 -0.04 -0.01 -0.14 -0.06 -0.01 -0.22 -0.05 0.13 -0.04 0.26 0.2
- -0.66 - 1.57 - - -0.39 -0.66 - - 2.31 1.03
- 1.64 - - - - - - 2.49 - - 1.71
- -0.13 - 0.77 - - - -0.12 - 1.12 -0.36 2.46
- - - - - - - - - - - 3.58
-0.71 -0.44 -0.53 -0.15 0.3 0.35 0.32 -0.11 -0.32 0.41 0.04 0.29
- 1.16 - - - - 0.16 - - 1.14 2.04 1.22
-1.71 0.13 - -1.83 -0.11 -0.8 0.57 -0.06 0.75 -2.55 0.97 1.36
-0.14 -1.11 -1.62 -0.14 -1.16 -0.46 0.59 1.05 1.41 -0.19 -0.26 -1.91
- - -0.32 - - - - 0.95 - 1.5 1.34 1.97
0.09 0.02 -0.1 0.09 -0.22 0.07 -0.05 -0.12 -0.09 -0.01 0.24 0.03
- - - - - - - - 2.47 - - 2.69
- 0.19 - - - - - - 1.3 - 0.29 2.84
- - - - - - - - - - - 3.58
- - - - - - - - - - - 3.58
0.01 0.07 -0.04 -0.06 0.01 -0.18 -0.06 0.21 0.04 -0.03 -0.15 0.13
0.01 -0.15 -0.57 -0.17 -0.09 -0.51 0.0 0.37 -0.17 0.01 0.3 0.55
0.68 -1.61 - -0.65 0.18 0.82 -0.0 0.36 - 0.37 0.72 0.39
0.22 -0.56 -1.31 0.75 -0.98 -0.31 0.18 -0.06 -0.42 0.28 0.61 0.25
-1.72 0.53 - -0.64 -1.09 - 0.08 0.43 0.56 0.63 -0.5 1.59
- - - - - - - 0.75 -0.51 -0.34 1.87 2.37
0.89 -0.22 0.03 0.29 0.12 -1.62 -0.15 0.15 -1.04 -0.63 0.34 0.29
0.72 -0.22 -0.81 0.2 0.02 -0.7 0.25 0.74 -1.58 -1.32 0.37 0.32
- - - - - - - - - - - 3.58
- 1.41 - 0.3 -1.03 - -0.6 0.74 0.53 -0.89 0.02 1.2
0.04 -0.15 -0.39 0.15 0.19 0.13 -0.1 0.04 0.12 -0.14 0.09 -0.09
-0.95 0.45 -2.03 0.9 - - -0.53 0.25 -2.02 -0.77 1.72 1.0
- - - - - - - - - - - 3.58
- - - - - - - - - - - 3.58
-0.11 -0.07 -0.37 -0.05 0.28 -0.02 -0.03 0.13 0.23 -0.09 0.21 -0.26
- - 0.51 - - - - - - 2.44 - 2.37
- - - - - - - - - - - 3.58
-1.32 -0.73 -0.26 -2.44 -1.89 1.29 -0.46 0.98 0.5 -1.08 -0.06 0.76
-0.85 -0.66 -0.12 -0.1 -1.34 0.37 0.24 -0.05 0.38 0.02 0.64 0.33
- 1.16 - - 0.79 - - 0.36 - 0.27 1.58 1.35
- - - - - - - - 1.88 2.01 - 2.1
-0.16 0.09 -0.6 0.33 0.21 0.47 -0.02 0.11 -0.14 -0.16 -0.2 -0.25
-1.71 0.34 -2.76 0.24 -3.06 0.16 -0.07 0.08 0.96 -1.19 0.35 1.13
0.74 -1.02 -0.64 -0.45 -2.18 0.86 -0.36 -0.36 - 0.42 1.1 0.46
- - - - - - - - - - - 3.58
-1.01 -0.2 -1.09 -0.99 -0.16 0.13 -1.7 1.34 -0.18 -0.47 -1.57 1.53
- - - - - - - - - - - 3.58
-1.65 -0.12 -1.41 -0.02 0.2 -1.39 0.48 0.16 1.1 0.23 -0.24 0.26
-0.15 0.02 -0.59 -0.47 -0.38 -0.36 0.0 0.71 0.45 -0.41 0.34 0.17
- - - - - - - - - 2.54 - 2.63
0.31 0.86 -0.9 -0.36 -2.61 -0.65 -0.97 -0.78 0.71 -0.57 1.14 0.3
-0.18 -0.05 0.04 -0.09 -0.09 -0.15 -0.07 -0.03 0.17 0.06 0.28 0.05
0.16 0.93 -3.7 -2.54 -1.69 0.29 -0.12 0.23 -1.09 0.95 0.52 0.33
- - - - 1.51 - - - - - 2.53 1.76
0.29 -0.27 -0.03 -0.32 0.1 -0.08 -0.3 0.08 -0.03 0.0 0.15 0.25
- - - - - - - - - - - 3.58
-0.01 -0.04 -0.35 -0.12 -0.06 -0.13 -0.11 -0.2 0.03 0.16 0.4 0.26
-0.38 0.65 -1.33 -0.6 -2.99 -0.48 -0.03 0.09 1.22 -1.22 0.94 0.05
0.44 0.14 -0.03 -0.08 -0.23 -0.16 -0.6 -0.51 -0.18 0.14 0.17 0.48
- - -1.91 -1.12 -0.45 1.45 -1.82 1.21 1.17 0.64 -1.0 -0.15
- - - - - - - - - - - 3.58
-0.63 0.14 -0.63 -0.03 -0.6 0.35 0.03 0.32 -0.01 -0.39 0.19 0.6
0.01 -0.03 0.01 -0.0 -0.05 0.06 0.01 0.0 0.0 -0.01 -0.01 0.01
0.96 0.21 -0.38 0.06 -0.58 0.16 -0.49 -0.39 -0.31 -0.31 0.39 -0.14
- - 0.17 - - - - 1.44 1.77 - - 2.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.