Heatmap: Cluster_17 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark	9 h after dark	11 h after dark
102871	0.44	-0.38	-0.11	-0.45	-0.64	-0.04	-0.23	0.17	-0.95	-0.25	0.43	0.94
111434	-	0.7	-1.57	-	0.35	0.25	-1.21	-	0.64	0.54	-1.65	1.93
113781	-	-	-	-	-	-	-	-	-	-	-	3.58
126836	-	-	-	-	-	-	-	-	-	-	-	-
136248	-	-	-	-	-	-	-	-	-	-	-	-
15599	1.98	1.16	-0.63	0.53	-	-	-0.45	-0.35	-0.58	-0.44	-	-0.32
16110	-	-	-	-	-	-	-	-	2.42	-	-	2.73
18006	-	-	-	-	-	-	-	-	-	-	-	3.58
18337	-	-	-	-	-	-	-	-	-	-	-	-
19741	-1.08	-0.28	-	-1.74	-0.48	1.24	0.84	-1.83	-	-0.6	0.44	1.7
230863	2.34	-0.27	-2.81	0.13	-	-0.71	-	-1.06	-1.04	-0.45	-1.93	1.2
235152	-	-0.11	-	-	-	1.56	1.84	-0.17	-	1.45	-	-0.1
28345	-	-	-	0.35	-	1.32	1.18	-	-	1.16	-	1.9
29169	-	-	-	-	-	-	-	-	-	-	-	3.58
38123	0.01	-0.31	-0.6	-0.88	-0.26	0.67	1.17	-	0.69	-1.7	-0.22	0.61
402661	-	-	-	-	-	-	-	-	-	-	-	-
403245	-	0.99	-	-	-	-	-	1.94	-	-	-	2.63
403250	-	-	-	-	-	-	-	1.98	-	-	-	3.01
403560	2.47	-	-	-	-	-	-	-	-	1.63	-	1.75
403691	-	-	-	-	-	-	-	-	-	-	-	-
403771	-	-	-	-	-	-	-	-	-	-	-	-
404136	-	-	-	-	-	-	-	-	-	-	-	-
404460	-	-	1.39	-	-	1.74	1.6	-	-	1.58	-	-
404580	-	-	-	-	-	-	-	-	-	-	-	-
404965	-	-	-	-	-	-	1.96	-	-	1.94	-	2.1
404990	-	-	-	-	-	-	-	-	-	-	-	3.58
406690	-	-	-	-	-	-	-	-	-	-	2.44	2.72
407019	-	-	-	-	-	-	-	-	-	-	-	3.58
407240	-	-	-	-	-	-	2.62	-	-	-	2.55	-
407844	-	-	-	-	-	-	-	-	-	-	-	3.58
409908	-	-	-	-	-	-	0.94	-	0.76	-	-	3.07
411336	-	-	-	-	-	-	-	-	-	-	-	-
411576	-	-	-	-	-	-	-	-	-	-	-	-
412234	-	-	-	-	-	-	-	-	-	-	-	3.58
412712	-	-	-	-	-	-	-	-	-	-	-	3.58
413007	-	-	-	-	-	-	-	-	-	-	1.81	3.09
413187	-	-	-	-	-	-	-	-	2.45	-	-	2.71
413189	1.86	0.86	-2.5	0.29	-1.04	-1.15	-	-0.27	-2.45	-0.67	-0.32	0.82
413427	2.0	-0.09	-	-	0.43	-	2.23	-	-	-	0.01	-
413516	2.6	-0.24	-	-0.8	-	0.58	-1.3	-	0.24	-	-	0.54
414540	1.73	0.64	-	1.07	-	-	-	-	-	-	-	2.33
415134	-	-	-	-	-	-	-	-	-	-	-	3.58
416201	-	-	-	-	-	-	-	-	-	-	-	-
416338	-	2.75	-	2.4	-	-	-	-	-	-	-	-
416402	-	-	-	-	-	-	-	-	-	-	-	-
416430	-	-0.26	-0.46	-	-	-0.11	-	-0.18	-	2.05	-	2.17
416777	-	-	-	-	-	-	-	-	-	-	-	3.58
417595	1.86	-	-	-	-	-	-	-	-	0.97	-	2.68
417638	-	-0.96	-0.23	-0.85	-0.77	-	0.75	-1.02	-0.18	-0.89	0.72	2.09
417909	-	-	-	-	-	-	-	-	-	-	-	-
417938	-	-0.18	-1.7	0.64	-	0.65	1.25	-	-1.65	0.54	-0.34	1.45
418356	-0.29	-0.09	-	-1.41	-	-0.97	-	-1.04	1.53	-1.13	0.63	2.0
418360	-	-	-	-	-	-	-	-	-	-	-	3.58
418718	-	-	-	-	-	-	-	-	-	-	-	3.58
418840	-	-	-	-	-	-	-	-	-	-	-	3.58
419220	-	-	-	-	-	-	-	-	-	3.58	-	-
419239	-	-	-	-	-	-	-	1.57	-	-	-	3.18
419750	-	-	-	-	-	-	-	-	-	-	-	3.58
420608	2.31	-	0.25	0.63	-	-	-	-	-	0.44	-	1.57
421411	1.36	0.53	-	1.24	-	-	1.51	-	0.37	-	-	0.59
421912	1.7	-	-	-	-	-	3.13	-	-	-	-	-
422367	-	-	-	-	-	-	-	-	-	2.52	-	2.65
422480	-	-	-	-	1.18	-	-	-	-	1.32	2.17	1.45
424595	-	-	-	-	-	-	-	-	-	-	-	-
425282	-	-	-	-	-	-	-	-	-	-	-	3.58
425362	0.15	-	-	0.61	1.16	-	-0.41	-0.6	0.75	-	-	2.01
426190	-	-	-	-	-	-	-	-	-	-	-	3.58
426724	-	-	-	-	-	-	-	-	-	-	-	-
427207	-	-	-	-	-	-	-	-	2.57	-	1.69	1.51
427481	-	-	-	-	-	-	-	-	1.79	-	-	3.09
427846	-	-	-	-	-	-	-	-	-	-	-	3.58
428016	-	-	-	1.37	-	-	-	-	-	-	-	3.23
428882	-	-	-	-	-	-	-	-	-	-	-	3.58
429772	-	-	-	-	-	3.58	-	-	-	-	-	-
429813	-	-	-	-	-	-	-	-	-	-	-	3.58
430319	2.9	-	-	-	-	-	-	-	-	-	-	2.18
430642	-	-	-	-	-	-	-	-	-	-	-	-
431545	1.38	0.61	-	-	-	0.87	-	-	-	-	0.38	2.24
431562	-	-	-	-	-	-	-	-	-	-	-	-
432424	-	-	-	-	-	-	-	-	-	-	-	-
442029	2.29	-0.3	-	-	-	-	-0.09	-	0.81	-	-0.53	1.55
48861	-	3.58	-	-	-	-	-	-	-	-	-	-
72266	-	-	-	-	-	-	-	-	-	-	-	-
75347	-	2.59	-	-	-	-	1.95	-	-	-	-	1.08
82899	-	-	-	-	-	3.58	-	-	-	-	-	-
88541	-	-	-	-	-	-	-	-	-	-	-	3.58
92689	-	-	0.65	-	1.86	-	1.54	-	-	-0.16	-	1.58
92732	-	-	-	-	-	-	-	-	-	-	-	3.58
99656	0.11	-	-	-1.01	-	1.24	0.61	-	-0.91	1.07	-	1.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.