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Heatmap: Cluster_11 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
- 3.16 - - - - - - - 1.6 - -
- 2.36 - - - - - - 1.87 - 1.69 -
- 2.93 - - - - -0.1 - -0.22 0.77 -0.18 -
- - - 2.64 - - - - 2.53 - - -
- 1.62 0.54 - - -0.92 -0.62 -0.6 0.26 0.89 0.31 0.41
- 2.7 - - - - - - - - 2.46 -
- 3.58 - - - - - - - - - -
-1.05 1.15 0.0 - -0.16 0.17 - 1.17 -0.88 0.17 0.5 -0.09
0.58 1.68 - 1.09 -1.09 - 0.6 0.68 0.05 - - -0.88
0.1 1.75 1.19 1.02 -1.12 -4.06 -3.86 -1.87 -1.25 -1.01 -0.36 -0.55
- 3.58 - - - - - - - - - -
-0.23 1.89 1.06 0.58 -1.57 -2.31 -2.84 -2.08 -1.3 -0.28 -0.71 0.15
-0.13 2.09 0.99 0.29 -1.33 -4.41 -2.58 -1.48 -1.57 -1.03 0.07 -0.36
0.24 2.08 0.8 0.07 -0.72 - -2.67 -2.19 -1.74 -0.86 0.3 -0.48
- 3.58 - - - - - - - - - -
- 3.07 - - - - - 1.85 - - - -
1.59 - - - - 0.89 1.83 - 1.84 - - -
-1.41 2.28 0.8 - -3.06 - 0.04 - - -3.15 1.91 -
- 3.58 - - - - - - - - - -
-0.01 1.05 -0.16 0.76 1.03 0.21 -0.96 -0.55 -0.58 -1.14 -1.05 -1.52
-0.38 2.04 0.51 - -0.76 -0.94 1.06 0.07 - -0.07 - -0.99
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.16 - - - - - - 1.95 1.22 - 0.41
0.03 0.42 0.01 0.03 0.38 -0.24 0.04 0.02 -0.52 -0.49 0.28 -0.31
- 3.58 - - - - - - - - - -
- 3.1 - - - - - - - - 1.78 -
0.49 1.68 0.93 0.16 0.16 -1.99 -0.96 -0.61 -3.11 -1.11 -0.74 -0.62
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.37 0.12 2.52 - - - - - - - -
- - - 2.64 - - - - 2.53 - - -
- 3.58 - - - - - - - - - -
0.67 1.27 -1.23 -1.15 0.42 -0.6 -0.46 -0.33 0.03 -1.31 -0.23 0.41
- 1.46 - 2.51 - - - 1.82 - - - -
- 2.61 0.42 -0.13 -0.98 -0.92 0.42 -1.15 - -0.27 - -
-0.51 0.69 -1.87 0.3 0.43 -0.17 -0.51 -0.73 0.58 0.32 -0.21 0.03
- 2.6 0.97 - -1.18 0.83 -1.05 - -1.21 -1.35 - -1.17
-0.51 0.68 -0.44 0.3 0.31 0.27 0.01 -0.15 -0.12 -0.05 -0.65 -0.24
- 3.58 - - - - - - - - - -
- 2.52 - - - -0.99 -0.49 -0.48 0.27 - 0.27 0.94
0.07 0.7 -0.55 -1.34 -0.59 -0.25 0.74 0.16 0.39 -0.5 -0.4 0.24
- 2.86 - 0.64 - - - - 1.68 - - -
- 3.58 - - - - - - - - - -
- 3.04 - 1.91 - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.71 - - - 0.81 1.0 - - - - 0.76
- - - 2.64 - - - - 2.53 - - -
- 1.8 1.55 0.63 - 1.42 - - - 0.44 - -
1.77 2.63 - - - - - 1.26 - - - -
- 3.58 - - - - - - - - - -
- 3.08 - - - - - 1.83 - - - -
0.19 0.28 0.14 0.1 -0.43 0.08 0.33 0.24 0.2 -0.69 -0.25 -0.68
- 3.58 - - - - - - - - - -
0.2 0.92 0.02 -0.25 -0.46 -0.05 0.3 0.65 -0.33 -0.56 -0.97 -0.67
-0.09 1.27 0.22 0.01 -0.43 -1.11 0.24 -0.7 0.05 -0.51 0.08 -0.55
- 3.58 - - - - - - - - - -
- 2.32 - - - - 0.7 - - 1.39 1.46 -
- 2.2 - 1.95 - - - - 1.83 - - -
- 2.5 - - - - - 1.24 2.0 - - -
0.42 -2.53 -1.65 - -0.13 -1.23 -1.12 -0.62 1.03 1.04 1.2 0.41
- 2.67 0.68 - - - - - - 0.99 1.03 -
- 3.58 - - - - - - - - - -
0.32 -0.86 -0.78 -1.14 -0.34 -0.59 -0.94 0.83 0.48 0.58 0.44 0.23
- 3.58 - - - - - - - - - -
1.01 0.29 - 0.33 0.19 - 1.35 0.5 1.26 - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
-0.56 1.43 - -0.06 0.35 - - - 0.34 0.79 - 1.77
1.12 2.2 - - 1.3 - - - - - 0.41 0.51
- 1.77 1.6 -0.11 - - - - - 0.85 0.86 0.04
1.35 2.03 - - - - - 1.8 0.91 - - -
- 3.58 - - - - - - - - - -
- 2.61 0.85 - - 1.1 - - - - - 0.95
- 2.34 - - - - - - - - 1.15 2.24
-0.45 1.88 -1.17 0.78 1.48 - - -0.72 - - 0.62 -1.06
- 3.58 - - - - - - - - - -
- 2.66 - - - - - - - - - 2.5
0.09 0.27 -0.32 0.19 -0.05 -0.1 -0.0 -0.04 -0.08 -0.06 -0.11 0.12
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.66 1.47 1.55 - - - - - - - -
- 3.04 - - - - - - - 1.92 - -
- 3.58 - - - - - - - - - -
0.47 0.48 0.19 0.46 0.15 0.25 -0.09 -0.62 -1.7 -0.11 -0.19 -0.49
0.77 1.87 - 0.15 1.09 - - - 0.24 - - 1.16
- 3.58 - - - - - - - - - -
- 2.67 - 2.49 - - - - - - - -
- 3.12 - - - - - - 1.72 - - -
- 3.58 - - - - - - - - - -
- 2.36 - 0.37 0.32 - - 0.87 0.3 - 0.35 -
- 2.14 - 2.93 - - - - - - - -
-0.04 0.6 -0.57 -2.26 -0.34 0.42 -0.58 0.13 -1.27 0.35 -0.14 1.1
- 1.61 - - - 1.37 - 1.48 1.25 0.25 - -
-0.19 0.6 0.01 -0.07 -0.07 -1.44 -0.72 0.27 -0.14 0.63 -0.15 0.21
- 3.58 - - - - - - - - - -
- - - - - - - - 2.67 - 2.5 -
0.57 2.02 1.5 1.03 -0.38 -3.05 -4.01 -3.7 -4.21 -3.2 -2.79 -1.93
0.3 2.14 1.56 0.82 -0.36 -3.33 -3.76 -3.95 -3.82 -3.34 -2.61 -1.81
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.14 0.27 -0.67 - - -0.77 - -0.55 -0.68 0.87 1.02
- 2.67 - 2.5 - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.61 - - - - 1.26 1.81 - - - -
- 2.35 - - - 1.35 - - - 1.02 - 1.21
- 2.88 - -0.18 -1.94 -0.71 - -0.24 - - -0.87 0.57
- 2.24 -0.59 0.22 1.16 0.97 -0.61 - - - - -0.73
- 3.58 - - - - - - - - - -
-0.45 1.24 -0.31 -0.59 -1.07 -0.86 -1.09 -0.28 -0.62 0.53 0.74 0.44
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 2.36 - 0.48 - - 1.43 - - - 1.48 -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.58 - - - - - - - - - -
- 3.12 - - - - - - - - 1.71 -
0.07 0.38 -0.08 -0.39 0.39 -0.89 -0.84 -0.29 0.2 0.21 -0.13 0.58
- 3.58 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.