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Heatmap: Cluster_7 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
- - - 2.62 - - - - - 2.55 - -
- - -0.57 -0.72 0.1 - - -0.59 - 1.43 2.19 0.79
-0.6 - - - - - -0.97 - - 2.31 2.01 0.9
-0.5 -0.6 0.09 2.09 -0.75 -1.65 -2.98 -2.54 0.56 - -0.52 0.95
- - - 3.58 - - - - - - - -
- - - 3.58 - - - - - - - -
- - - 1.7 - 1.32 - - 1.66 - 1.63 -
0.88 0.29 -0.62 0.62 -1.35 -0.43 - -0.98 -1.54 0.48 1.39 -0.39
- - - 2.66 - - - - - 1.49 1.53 -
- - - 2.91 - - - - 1.14 - 1.18 -
-0.41 0.33 -0.74 0.67 -0.23 -0.8 -0.23 -0.81 -0.21 0.22 0.37 0.71
- - - - - 2.42 - - - - 2.73 -
- 1.37 - 2.69 - - 1.57 - - - - -
-2.71 1.01 -1.4 -1.51 -3.38 -0.37 -0.7 -1.4 -0.08 1.54 0.84 0.69
2.08 1.06 - 1.44 - - 1.57 - - - - -
-1.09 -0.48 -2.18 0.4 -0.27 -1.36 0.41 -0.24 -0.08 0.56 1.01 0.52
- -2.11 -1.58 1.43 0.29 -0.94 0.94 -1.78 -0.15 0.95 -0.26 0.16
- - - 2.06 - 1.81 - - - - 2.11 -
- -0.7 0.02 -2.02 0.73 -0.97 0.23 0.14 0.45 -0.08 0.82 0.68
-0.11 -0.38 -0.71 1.64 -1.75 -2.12 -0.1 - -0.25 0.16 -0.26 1.21
- 2.45 - 2.71 - - - - - - - -
- -0.25 -1.37 -0.87 -0.87 - 1.21 - - 0.57 1.61 1.5
- - - 3.58 - - - - - - - -
-0.96 -0.39 -0.18 0.3 -0.07 0.21 0.37 0.11 0.25 0.32 -0.23 -0.24
-0.36 -1.01 0.45 1.29 0.63 -0.07 -0.81 - -2.12 0.71 0.32 -0.46
- - - 3.58 - - - - - - - -
- - - - - 2.42 - - - - 2.73 -
- - 0.83 1.33 - 1.5 - - 1.3 - 1.26 -
- - - 3.58 - - - - - - - -
0.03 0.16 -1.15 1.46 0.06 -0.15 -0.25 -0.77 -1.55 -0.38 0.43 -0.27
-2.62 -0.11 -1.61 -0.04 -0.07 -1.91 1.25 -0.1 -1.48 -1.26 1.1 1.11
- - - 2.52 -0.37 - 0.65 - 0.33 0.99 - -0.59
- 0.64 1.18 2.61 - - - - - - - 1.06
- - - 3.58 - - - - - - - -
-0.69 0.12 -0.46 0.35 0.15 0.36 0.16 -0.22 -0.01 -0.02 -0.1 0.02
-0.58 - -2.72 1.67 -1.11 - -2.1 -1.09 0.57 1.31 0.66 0.37
- - - 2.64 1.46 -0.01 -0.02 - - - - 0.08
- 1.25 1.78 2.63 - - - - - - - -
- - - 3.58 - - - - - - - -
- - - 3.12 - - - - - 0.71 0.73 -
- - - - - - - - - 2.29 1.62 2.02
- - - 2.86 - - - - - - 2.25 -
- - - - - - 2.38 - - - 2.77 -
-0.85 -0.49 - 3.05 -1.23 - 0.37 - - -1.54 -1.41 -
- 0.78 - 2.05 1.55 -0.34 -0.15 -0.33 - -0.44 - -
- - - 2.0 - - - - - 1.93 2.06 -
- - - - - - - 2.05 - 1.91 2.04 -
- - - 3.58 - - - - - - - -
- 1.16 - 0.87 - - 1.12 - - - 0.93 1.95
- 2.47 - - -0.23 - 0.08 - - - 1.47 0.84
2.31 - - 2.82 - - - - - - - -
- - - 2.09 - 1.79 - - - - 2.1 -
- - -0.22 2.95 -0.32 - - - - - 1.38 -
-0.32 0.52 -0.52 0.61 -0.42 -0.27 -0.9 -0.62 -1.18 0.59 0.59 0.4
- - - 3.08 - - 0.79 - - - 0.84 -
- - - - - 2.42 - - - - 2.73 -
-0.12 0.5 - 1.81 -1.93 - -0.23 -1.98 - 0.46 0.98 0.52
- - - 3.58 - - - - - - - -
-0.15 0.12 -0.97 1.57 -0.65 -0.29 -0.08 -1.39 0.1 0.1 -1.42 0.32
- 0.33 - 1.59 0.71 - - - - 1.57 1.64 -
- - - 3.14 1.67 - - - - - - -
- 0.4 - 1.78 1.24 - 1.95 - 0.04 - - -
- 2.42 - - - - - - - - 2.73 -
1.18 - - 2.48 0.54 - - - - - - 1.43
-1.96 -0.22 -0.98 0.84 0.6 0.17 1.39 0.43 -2.63 -1.73 0.26 -1.65
0.97 0.04 -1.64 0.51 -1.05 -0.5 -0.63 0.3 -2.59 0.27 0.53 0.46
- - - 2.52 - - 2.65 - - - - -
- 1.8 - 2.06 - - - - - - 2.12 -
- - - 3.58 - - - - - - - -
- 0.42 - - -0.68 -0.57 - 0.54 -0.46 1.65 1.74 -0.47
- 1.7 - -0.16 - - 1.67 - - - 1.48 0.91
- - - 3.58 - - - - - - - -
- - - 3.58 - - - - - - - -
- - - 2.56 - - - - - - 2.61 -
- - - 3.58 - - - - - - - -
- - - 3.58 - - - - - - - -
- - - 3.58 - - - - - - - -
- -0.95 - 2.18 -1.01 - 0.39 -1.18 1.11 0.77 - -0.24
1.5 - 0.5 - - - 1.13 - - 0.81 1.93 -
- - 2.31 2.81 - - - - - - - -
0.37 0.28 -0.74 0.48 0.17 -0.62 -0.34 0.17 -0.35 -0.22 -0.29 0.43
- 0.14 -0.11 2.27 1.87 0.59 - - - - - -
- - 0.63 2.67 - - - 1.07 - - 1.0 -
- - - 3.29 - - - - - 1.13 - -
-1.62 0.23 -1.07 2.41 1.42 -1.02 -2.43 -1.08 -0.57 -4.81 -3.21 -3.69
1.44 0.1 -0.5 0.99 -1.97 -0.91 0.11 -1.84 - -1.1 0.24 0.8
-0.98 0.82 - 0.96 -1.51 0.05 -1.69 - -0.17 1.14 1.04 -0.1
-0.57 0.92 -0.59 0.75 -1.28 -1.13 -0.2 -0.71 0.62 0.12 0.15 -0.0
- - - 2.56 - - - - - - 2.61 -
-0.79 -0.14 -0.08 0.55 0.11 0.28 0.21 -0.05 -0.21 0.12 -0.3 -0.12
- -2.12 0.04 1.15 0.6 1.2 0.3 -0.65 -0.79 -0.59 -1.16 0.21
1.06 0.74 0.49 - - 0.5 - 0.51 - 1.37 0.5 -
0.6 1.58 - 1.84 - - 0.78 0.33 -0.07 - - -
1.19 - - 2.55 - - 0.37 - - 1.37 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.