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Heatmap: Cluster_41 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
0.51 -0.26 -0.37 -0.45 -0.53 -0.16 0.25 0.05 -0.09 0.22 0.14 0.29
-0.12 -0.56 - -0.69 - 1.4 0.31 1.47 0.39 -0.71 -0.74 -0.73
-0.42 -0.96 -0.86 -0.55 -0.76 -0.15 0.02 0.09 0.86 0.55 0.53 0.28
0.57 -0.82 -0.59 -0.79 -2.7 -1.69 -0.48 0.74 0.64 1.08 0.19 0.07
- - - - 1.4 - - 2.33 - 1.09 1.14 -
- - - - - 2.31 - 2.82 - - - -
-0.9 -0.04 -0.46 -0.46 -0.68 -0.37 0.52 0.52 0.44 0.63 0.07 -0.29
0.17 -0.13 -0.22 0.01 -0.24 -0.1 0.18 0.19 0.42 -0.25 -0.22 0.01
0.12 -0.2 -0.24 -0.53 -0.26 -0.24 -0.24 0.3 0.44 0.29 0.17 0.07
- - - 0.62 - - 1.34 -0.36 0.7 1.1 1.35 -0.28
0.2 -0.88 -0.37 -1.38 -1.8 -1.09 -0.03 0.69 1.0 0.56 0.14 0.29
-0.15 -1.73 -1.93 -0.49 -1.74 -0.75 -0.59 1.06 1.28 0.62 -0.07 0.34
- - - - - - - 2.14 - 1.84 - 2.01
- - - - - 0.02 1.79 2.46 - -0.01 0.01 -
-0.98 -2.5 -2.51 - - -1.5 1.71 1.38 1.37 0.18 -0.32 -1.29
-4.23 - -5.65 -4.93 -3.83 -0.06 1.52 1.62 0.6 0.9 -0.05 -0.8
-1.74 -0.99 -2.21 -4.0 -1.29 -2.82 0.75 1.31 0.77 1.13 0.83 -0.85
- -1.85 - - - - 0.94 1.25 1.12 0.68 -1.54 1.72
-0.48 -0.28 -0.35 0.27 -0.31 -0.41 0.44 -0.52 0.28 0.32 0.22 0.3
- - - - - 1.74 - 2.25 - 1.96 - -
- 1.43 - - - 2.44 - 1.95 - - - -
0.48 -0.92 0.3 -2.21 -2.27 -0.58 -0.44 -0.1 1.35 0.05 0.37 0.26
-3.54 -1.87 -1.81 -1.01 -0.48 0.37 0.91 0.7 0.65 0.77 0.54 -0.71
- 0.81 - - 0.01 - - - - 2.02 2.05 0.07
-2.28 -0.76 - -0.68 0.35 0.46 0.44 1.4 0.92 0.35 -1.08 -1.75
- 0.7 -1.21 - -1.63 -1.13 1.66 1.48 -1.5 -0.71 -2.67 1.07
- - - - 0.52 - -0.32 1.89 -0.48 1.36 1.01 -0.44
-2.76 -1.71 - -2.38 - -0.07 1.58 1.27 1.14 0.27 -0.04 -0.68
0.11 -1.95 -2.27 -2.83 -1.43 -1.67 0.85 1.31 0.86 0.16 0.11 0.4
0.34 -1.71 -0.8 -0.42 -1.19 -1.72 0.06 0.49 1.45 0.55 0.01 -0.48
-1.15 -2.38 -2.66 -1.47 -0.89 0.76 1.18 0.72 0.35 0.65 0.33 -0.77
0.34 -1.04 -0.53 -1.79 -1.85 -0.53 0.31 0.78 0.81 0.59 0.22 -0.14
0.3 -0.74 -1.49 -1.18 -1.31 -2.11 0.17 0.59 0.6 0.93 0.22 0.61
0.2 -0.53 -1.23 -2.07 -2.46 -0.99 -0.06 0.96 0.84 0.52 0.56 0.26
-0.83 -3.2 -1.68 -3.17 -3.06 -0.26 0.31 1.21 1.31 0.86 0.51 -0.53
-0.9 -0.99 -1.12 -1.85 -1.47 -1.12 0.02 0.76 0.61 0.89 0.88 0.55
0.42 -0.03 -1.73 -1.25 - -3.6 -0.55 0.16 1.28 0.61 0.78 0.48
-0.22 - - - - -2.58 1.43 1.36 1.17 1.0 -1.26 0.06
-1.36 -3.32 - - -3.67 -0.38 1.12 1.73 0.85 0.91 -1.01 -0.03
-1.11 - - - - -0.46 1.59 1.78 1.05 -0.04 -0.13 -1.31
- - -1.39 - - - 1.51 1.82 1.02 0.62 -0.64 0.05
0.17 -1.63 -2.21 -1.71 -1.26 -0.3 0.27 0.47 0.78 0.95 0.41 0.3
-0.75 -1.94 -1.11 -2.44 -1.86 -0.53 0.54 1.49 0.89 0.49 0.45 -0.6
- - - - - - - - - 2.57 2.6 -
- - - - - - 1.93 - - 1.94 - 2.12
-0.51 -1.01 -5.05 -3.69 -4.38 -2.8 0.76 1.7 1.1 0.57 0.05 -0.17
-2.17 -6.04 - -3.11 -5.98 0.11 1.9 1.64 1.15 -0.12 -1.36 -2.48
1.32 -0.98 -1.68 -1.32 -2.71 -1.07 -1.63 -0.81 -0.69 0.69 1.14 1.22
-0.28 0.24 -1.42 -0.35 0.13 0.83 0.45 0.73 -0.29 -0.74 -0.53 -0.26
- - - - - - 0.84 - 0.88 2.32 1.76 -
0.08 -0.85 -1.41 -1.11 -1.52 -1.75 -0.23 0.44 0.72 0.48 0.84 0.9
-0.61 -1.63 -3.3 -2.28 -3.4 -2.29 0.55 1.39 1.04 1.07 0.25 -0.03
- - - - - - 0.84 2.16 1.15 1.45 -0.34 -
- - - - - -1.96 1.5 2.0 1.43 0.27 -0.45 -1.86
- -0.88 -1.02 - - - 0.77 1.75 -0.01 1.48 - 1.08
-2.03 -3.62 -2.63 -2.74 - -2.0 0.68 0.92 1.39 1.24 0.38 0.42
- - - - - - - - - 2.58 2.59 -
0.11 -0.35 -0.54 -0.28 -0.19 -0.09 0.51 0.73 0.22 0.09 -0.32 -0.54
- - - - - 0.31 0.83 1.91 0.84 1.78 - -
-1.58 0.21 - -2.35 - -0.41 0.41 1.76 1.12 0.18 -0.75 -0.06
0.44 -1.18 0.35 -1.59 -3.13 -2.08 -1.27 0.01 0.44 1.34 0.75 0.32
0.87 -0.5 -1.52 -1.79 -1.56 -1.73 0.41 1.02 1.33 0.48 -1.82 -0.65
- - - - - 0.26 2.0 2.01 0.21 0.02 - -0.77
-0.12 -1.23 -1.75 -2.18 -2.23 -1.79 0.34 0.82 0.54 0.99 0.8 0.5
0.33 0.47 -0.81 -1.72 -2.43 -3.58 -0.91 0.05 0.58 0.91 0.98 0.38
0.47 -0.24 -0.41 -0.35 -1.26 -3.4 -1.86 0.61 0.54 0.98 0.05 0.55
-0.31 - - - - 1.55 1.23 2.08 -0.76 - -0.95 -0.78
- - - - - - - - - 2.57 2.6 -
- - - - - - 1.07 0.17 1.05 1.44 0.93 1.06
0.76 -0.7 -1.53 -3.12 -2.3 -1.01 -0.02 1.09 1.07 0.51 -0.2 0.04
-0.24 -1.03 -2.44 -2.07 -1.63 0.07 0.58 1.32 0.74 0.76 -0.38 -0.41
-1.14 -4.21 -3.12 -2.05 - 0.3 1.35 1.52 0.99 0.21 -0.36 -0.81
-0.22 -0.8 0.06 - - - 0.17 -0.72 0.15 1.55 0.6 1.16
- - - - - 1.96 0.38 1.58 1.38 0.26 - -
- - - - - - 1.52 2.63 1.56 - - -
-0.03 -0.44 -1.25 -1.14 -0.86 -0.89 -0.18 0.56 0.61 1.02 0.47 0.04
- - - - - - 1.08 2.13 1.84 0.34 -0.57 -
0.28 - -2.71 -2.27 -2.77 -2.33 -0.51 1.12 0.57 1.33 0.83 0.52
-0.05 -1.06 -0.77 -1.39 -2.6 -0.49 0.54 0.93 0.55 0.68 0.25 0.13
0.65 - - - - - 0.28 0.29 1.51 1.3 1.08 -0.82
1.63 -1.17 -2.79 -2.87 -4.01 -3.9 -0.32 0.38 -0.0 0.52 1.02 0.58
0.44 -1.04 -2.44 -2.47 -1.19 -0.87 0.35 0.12 0.79 0.65 0.99 0.23
0.21 -0.12 -0.45 -0.45 -0.43 -0.31 0.04 0.26 0.34 0.26 0.24 0.07
-1.93 -1.28 -0.67 -0.61 -1.43 0.55 0.91 0.62 0.63 0.38 -0.01 -0.09
0.46 -0.15 -0.25 -0.27 -0.01 -0.68 -1.23 -1.18 -0.59 1.06 0.04 0.83
-0.75 -1.13 -2.42 -1.32 -0.48 0.55 0.79 1.02 0.66 0.39 0.13 -1.18
-0.53 -0.58 -2.67 0.08 -2.35 -2.0 0.28 0.85 -1.16 1.35 0.89 0.17
1.08 - -1.57 - - -0.55 0.03 0.56 1.11 1.33 0.42 -1.47
0.58 -0.23 -1.18 -0.48 -0.72 -1.59 -1.1 0.16 0.12 0.87 0.5 0.72
0.23 0.23 - -2.39 -1.35 -2.09 0.8 -0.13 0.16 0.8 1.25 -0.1
- - - - - - 2.58 2.59 - - - -
-0.31 -0.12 -0.9 -0.98 -0.65 -0.19 -0.12 0.42 0.48 0.79 -0.07 0.46
- - - - - - 1.69 2.3 1.78 -1.24 - -
-0.92 -0.06 -2.3 -0.93 -1.48 -1.4 0.49 0.95 0.94 0.37 0.15 0.47
1.2 - -1.72 -1.72 - -0.04 -1.52 -0.7 -0.09 1.36 1.02 0.7
- - - - 1.3 - 1.12 - 1.35 - 1.23 1.31
0.72 0.32 -1.2 0.12 -1.01 -0.45 0.92 - 0.21 -0.71 0.1 0.7
-0.95 -1.53 - - - - 1.78 2.07 0.75 -0.14 -0.13 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.