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Heatmap: Cluster_28 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
-1.68 -2.26 -1.46 0.58 0.17 0.04 -0.31 -0.32 0.44 -1.45 0.97 1.13
- 1.65 - - -0.91 -1.1 - 1.73 -0.76 -0.92 1.78 -
- -0.39 -0.51 -0.09 -0.01 - - 0.12 -0.2 0.85 1.5 1.01
- - - - - - - 2.74 - 2.41 - -
- - - - - - - 3.58 - - - -
0.7 0.26 - - - - - 2.34 1.02 0.04 0.08 -
- -2.33 -2.44 -1.95 1.4 0.03 -2.12 1.7 1.36 0.72 - -
- - - - - 1.86 - 3.06 - - - -
- - - - - - - 3.58 - - - -
0.22 -0.1 -0.04 -0.46 0.11 0.05 -0.43 0.33 0.17 -0.05 -0.11 0.1
- - - - - 1.19 0.95 2.07 - 1.84 - -
- 1.74 - - 1.95 - - 2.26 - - - -
- - - - - - 2.48 2.68 - - - -
- 0.79 - - - - - 1.87 0.7 - 0.67 1.77
- - - - - - - 3.58 - - - -
1.6 - -0.71 - - - 1.08 2.51 - -0.82 - -
- - - - - - - 2.92 - - 1.07 1.23
- 1.33 - 0.21 - - -1.32 1.44 -1.2 0.91 0.27 0.77
1.35 -1.29 -2.22 -2.14 -0.74 0.35 -0.16 0.8 - 1.15 0.91 -
- - - - - - - 3.58 - - - -
- - - - - - 2.48 2.68 - - - -
- - - - - - 1.58 1.78 - 1.45 1.5 -
- - - 1.04 - 2.33 - 2.3 - - - -
- - - - - - - 3.2 1.5 - - -
- - - - - - - 2.77 -0.04 0.06 1.01 0.18
- 0.24 - - - 0.0 0.19 2.52 -0.12 - -0.08 0.08
- 0.3 - - 1.21 0.17 - 1.96 1.79 - - -
- - - - - - - 3.58 - - - -
-0.6 -0.38 -0.22 0.26 -0.27 0.17 -1.27 -0.3 0.27 -0.91 0.69 0.99
- - - - - - 1.35 2.36 1.19 1.03 - -
- 1.29 - - - - - 2.37 - 1.15 1.11 -
- -2.67 -2.23 -1.79 -0.91 0.75 0.18 1.17 0.92 0.31 0.64 0.06
- 0.88 -0.24 1.13 - - 1.38 - 1.19 0.17 - 0.14
- 1.04 0.13 - - - - 1.7 0.03 -0.19 1.44 -0.01
-0.73 0.59 -0.45 - -0.37 1.46 -0.49 1.01 -1.4 -0.46 -0.52 0.15
- - - - - - - - 1.86 - 3.07 -
- 0.51 1.04 - - 0.52 - - - - 2.38 0.9
- - - - - - - 2.72 - - 2.44 -
-3.05 0.11 -1.33 -0.08 0.2 0.22 0.15 0.71 -0.07 0.64 0.02 -0.19
-1.03 -2.05 - -0.79 -0.67 0.04 -1.74 2.37 0.59 -0.17 0.22 -
1.07 0.3 -0.03 -1.79 0.1 0.62 -0.74 1.01 -0.45 -0.01 -1.76 -2.65
- - - - - - - 3.58 - - - -
0.82 - - - 0.18 0.11 - 1.98 0.99 0.09 - 0.06
0.35 0.11 -0.57 0.24 -0.09 0.04 0.11 -0.44 0.05 0.07 -0.22 0.1
- 0.96 - 1.26 - - - 2.94 - - - -
-0.69 -1.01 -0.02 -0.87 -0.09 -0.05 0.49 1.53 -1.79 -0.16 -0.27 0.18
- -0.48 - - -0.1 - - 1.36 1.03 0.76 1.15 0.86
- - - - - - - 2.63 2.54 - - -
- - - - - - - 2.68 - - 2.48 -
- - 1.92 - - 1.93 - 2.13 - - - -
- - - - 0.93 - - 3.06 - - - 0.81
0.64 0.12 -0.84 -0.14 -0.61 0.26 0.12 -0.27 -0.28 -0.27 0.35 0.25
- 2.0 - - - - - 2.08 1.91 - - -
- - 0.89 - - - 1.21 1.52 - 1.3 1.32 -
-0.58 0.63 -1.49 -0.34 0.7 -1.16 0.85 -2.27 0.61 -0.03 -2.34 0.88
- - 2.58 - - 2.59 - - - - - -
- - - - - 1.68 0.83 2.81 - - - -
0.45 0.78 -0.69 0.75 0.24 -1.25 -1.29 -1.47 0.31 0.02 0.72 -1.53
- - - 1.86 - - - 2.12 - - - 2.01
- - - - - - - 3.58 - - - -
- 2.08 - - - 1.96 - - - - 1.96 -
- - - - - - - 3.58 - - - -
-2.37 - - -1.47 -0.71 1.57 -0.04 0.21 0.98 0.64 -0.33 0.51
- -0.39 0.26 -2.78 0.85 1.8 -1.67 1.73 -1.31 - - -0.79
-2.93 -0.66 -2.34 -0.86 -0.41 0.15 0.78 1.55 0.95 0.68 -3.57 -1.41
- - 1.96 - - - - 2.17 1.85 - - -
- - - - - - - 3.58 - - - -
- - - - - - 0.79 2.46 - 2.25 - -
- - 0.24 1.26 - 0.26 0.45 2.21 0.29 - - -
1.55 -2.14 0.8 -1.88 0.52 0.62 - 0.84 0.33 -1.92 -0.86 -
- - - - - 1.52 - 3.19 - - - -
- - - - - - - 3.58 - - - -
0.37 0.19 -0.24 -0.28 -0.01 -0.1 0.33 -0.24 0.1 -0.18 -0.4 0.19
- -0.6 0.15 0.17 1.28 -0.83 -0.64 1.92 -0.8 - 0.16 -
- 0.14 0.02 - - 0.14 - 1.65 - - 1.45 1.54
- - - - - - - 3.58 - - - -
1.41 - - - - - - 3.22 - - - -
- - - - - - - 3.58 - - - -
- - - - - - -0.38 2.41 -0.5 -0.5 1.88 -0.3
- - 1.01 0.43 - 2.1 - 1.64 - 0.31 - -
- - - - - - - 3.58 - - - -
- 0.47 - 0.8 -0.03 -0.21 1.5 - 0.66 - -0.21 0.81
- 2.55 - - - - - 2.62 - - - -
- 0.68 - 0.5 - - - 1.76 1.51 0.43 0.48 -
- 2.09 1.95 - - - - - - - 1.96 -
0.65 - - - - 0.94 0.88 1.14 0.82 0.83 - -0.11
- - - - - - - 3.58 - - - -
- 2.02 - - - 0.55 0.5 - 0.43 - 1.89 -
- - - - - 2.6 - 2.57 - - - -
-1.12 -0.7 0.28 -0.88 0.89 0.75 -1.83 1.02 0.77 0.1 -0.89 -
- -0.14 -1.39 0.13 -1.33 -0.88 0.21 2.06 0.69 -0.9 0.27 -
- - 0.53 - 2.0 1.19 - 1.16 - - - 1.04
- - - - - - - 3.58 - - - -
- - - - - - 1.11 2.42 - 1.19 1.16 -
- - 1.92 - - - - 2.14 - - 1.93 -
- - - - - - - 3.21 1.46 - - -
- - - - - - - 3.58 - - - -
- - - - - - - 3.58 - - - -
- - - - - - - 3.58 - - - -
-0.48 -0.77 0.02 -0.53 -0.45 0.69 0.51 0.75 -0.32 0.32 -0.35 -0.53
- - - 2.2 - - - - 1.35 - 1.23 1.33
0.23 0.24 0.21 -0.5 0.54 0.03 -1.25 -0.31 0.02 -0.88 -0.18 0.71
- - - - - - 0.58 1.78 - 2.08 1.5 -
- - - - - - 1.58 3.17 - - - -
- - - - - 2.59 - 1.66 1.5 - - -
- - - - - - - 2.74 2.41 - - -
1.35 - - - - - - 2.52 0.9 - - 0.89
-0.73 0.48 0.23 0.31 -1.05 -0.09 -0.44 0.62 -0.44 0.29 -0.64 0.37
- - - - -0.46 -0.35 -0.35 2.35 -0.23 1.11 -0.35 -0.27
- - - - - - - 2.74 - 2.41 - -
- - - - 1.97 2.03 - 2.0 - - - -
- - - - - - - 3.58 - - - -
- - - - - - - 3.58 - - - -
- 2.07 - - - - - - 1.98 - 1.94 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.