Expression profile for evm.model.tig00000378.19 (evm.model.tig00000378.19)


Attention: This gene has low abundance.

Description : (q6zgl4|atg5_orysa : 130.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (at5g17290 : 128.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)

Condition specificity: 1 h after dark (SPM: 0.39, entropy: 3.08, tau: 0.31)
Tissue specificity: Night (SPM: 0.51, entropy: 2.25, tau: 0.26)
ZT time: ZT16-19 (SPM: 0.52, entropy: 2.25, tau: 0.27)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.