1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00000378.19

evm.model.tig00000378.19


Description : (q6zgl4|atg5_orysa : 130.0) Probable autophagy protein 5 - Oryza sativa (Rice) & (at5g17290 : 128.0) Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.; AUTOPHAGY 5 (APG5); FUNCTIONS IN: transporter activity; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 5 (InterPro:IPR007239); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)


Gene families : OG_42_0006677 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006677_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000378.19
Cluster HCCA clusters: Cluster_149


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA InterProScan predictions
BP GO:0006914 autophagy IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007239 Atg5 76 288
No external refs found!