Expression profile for evm.model.tig00021108.30 (evm.model.tig00021108.30)


Attention: This gene has low abundance.

Description : (at3g44530 : 310.0) Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2.; homolog of histone chaperone HIRA (HIRA); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), TUP1-like enhancer of split (InterPro:IPR011494), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G64630.2). & (p93107|pf20_chlre : 80.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 620.0) & (original description: no original description)

Condition specificity: 11 h after light (SPM: 0.47, entropy: 3.25, tau: 0.47)
Tissue specificity: Noon (SPM: 0.63, entropy: 2.25, tau: 0.46)
ZT time: ZT8-11 (SPM: 0.63, entropy: 2.58, tau: 0.46)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.