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Expression profile for evm.model.tig00021428.19 (evm.model.tig00021428.19)

Attention: This gene has low abundance.

Description : (at5g08470 : 170.0) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.; peroxisome 1 (PEX1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress; LOCATED IN: peroxisome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Aspartate decarboxylase-like fold (InterPro:IPR009010), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peroxisome biogenesis factor 1, N-terminal (InterPro:IPR015342); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 45022 Blast hits to 26157 proteins in 3042 species: Archae - 1897; Bacteria - 15808; Metazoa - 7500; Fungi - 5597; Plants - 4311; Viruses - 29; Other Eukaryotes - 9880 (source: NCBI BLink). & (q96372|cdc48_capan : 113.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 340.0) & (original description: no original description)

Condition specificity: 1 h after light (SPM: 0.4, entropy: 3.25, tau: 0.35)
Tissue specificity: Dawn (SPM: 0.51, entropy: 2.25, tau: 0.24)
ZT time: ZT0-3 (SPM: 0.52, entropy: 2.58, tau: 0.29)