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3. MA_15842g0010

Expression profile for MA_15842g0010 (MA_15842g0010)

Attention: This gene has low abundance.

Description : (at3g62980 : 510.0) Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation.; TRANSPORT INHIBITOR RESPONSE 1 (TIR1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1020.0) & (original description: no original description)

Condition specificity: 7 h after light (SPM: 0.35, entropy: 2.4, tau: 0.19)
Tissue specificity: Noon (SPM: 0.46, entropy: 1.79, tau: 0.13)
ZT time: ZT4-7 (SPM: 0.47, entropy: 2.25, tau: 0.17)