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3. MA_53545g0010

Expression profile for MA_53545g0010 (MA_53545g0010)

Attention: This gene has low abundance.

Description : (at5g12330 : 144.0) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.; LATERAL ROOT PRIMORDIUM 1 (LRP1); FUNCTIONS IN: protein homodimerization activity; INVOLVED IN: response to auxin stimulus, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Protein of unknown function DUF702 (InterPro:IPR007818), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2). & (reliability: 288.0) & (original description: no original description)

Condition specificity: 3 h after dark (SPM: 0.43, entropy: 3.08, tau: 0.4)
Tissue specificity: Night (SPM: 0.5, entropy: 2.25, tau: 0.23)
ZT time: ZT16-19 (SPM: 0.51, entropy: 2.25, tau: 0.26)