Expression profile for evm.model.contig_3497.3 (evm.model.contig_3497.3)

Description : (at1g05910 : 434.0) cell division cycle protein 48-related / CDC48-related; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1); Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526; Bacteria - 25275; Metazoa - 14857; Fungi - 7046; Plants - 4267; Viruses - 557; Other Eukaryotes - 14126 (source: NCBI BLink). & (p54774|cdc48_soybn : 228.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 868.0) & (original description: no original description)

Condition specificity: 5 h after dark (SPM: 0.37, entropy: 2.36, tau: 0.26)
Tissue specificity: Night (SPM: 0.48, entropy: 1.46, tau: 0.2)
ZT time: ZT16-19 (SPM: 0.5, entropy: 1.46, tau: 0.25)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.