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  5. evm.model.contig_3497.3

evm.model.contig_3497.3


Description : (at1g05910 : 434.0) cell division cycle protein 48-related / CDC48-related; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1); Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526; Bacteria - 25275; Metazoa - 14857; Fungi - 7046; Plants - 4267; Viruses - 557; Other Eukaryotes - 14126 (source: NCBI BLink). & (p54774|cdc48_soybn : 228.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 868.0) & (original description: no original description)


Gene families : OG_42_0005707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3497.3
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
170139 No alias cell division cycle protein 48-related / CDC48-related 0.01 Orthogroups_2024-Update
GRMZM2G040079 No alias cell division cycle protein 48-related / CDC48-related 0.01 Orthogroups_2024-Update
MA_10432357g0010 No alias (at1g05910 : 1177.0) cell division cycle protein... 0.02 Orthogroups_2024-Update
PSME_00008166-RA No alias (at1g05910 : 838.0) cell division cycle protein... 0.02 Orthogroups_2024-Update
Seita.2G272400.1 No alias component *(BRAT1) of anti-silencing regulator complex 0.01 Orthogroups_2024-Update
evm.model.tig00001042.14 No alias (at1g05910 : 332.0) cell division cycle protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 1058 1134
IPR003959 ATPase_AAA_core 521 667
No external refs found!