Expression profile for PSME_00002247-RA (PSME_00002247-RA)


Attention: This gene has low abundance.

Description : (at5g44400 : 388.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44390.1); Has 6440 Blast hits to 6338 proteins in 980 species: Archae - 110; Bacteria - 3349; Metazoa - 50; Fungi - 1662; Plants - 680; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (reliability: 776.0) & (original description: no original description)

Condition specificity: 2 h after dark (SPM: 0.99, entropy: 1.79, tau: 0.96)
Tissue specificity: Night (SPM: 0.99, entropy: 1.79, tau: 0.96)
ZT time: ZT12-15 (SPM: 0.99, entropy: 1.79, tau: 0.96)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.