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Expression profile for PSME_00029098-RA (PSME_00029098-RA)

Attention: This gene has low abundance.

Description : (o04886|pme1_citsi : 512.0) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at3g14310 : 510.0) encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.; pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 1020.0) & (original description: no original description)

Condition specificity: 6 h after dark (SPM: 0.54, entropy: 2.58, tau: 0.33)
Tissue specificity: Midnight (SPM: 0.54, entropy: 2.58, tau: 0.33)
ZT time: ZT16-19 (SPM: 0.54, entropy: 2.58, tau: 0.33)