Description : chromatin remodeling factor (Chd1). component CHR5 of SAGA transcription co-activator complex
Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Marchantia polymorpha: Mp1g05480.1 | |
Cluster | HCAA Clusters: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
130534 | No alias | chromatin remodeling 4 | 0.02 | Orthogroups_2024-Update | |
155996 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.03 | Orthogroups_2024-Update | |
440815 | No alias | chromatin remodeling 5 | 0.04 | Orthogroups_2024-Update | |
A4A49_30694 | No alias | protein chromatin remodeling 5 | 0.02 | Orthogroups_2024-Update | |
At2g28290 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | Orthogroups_2024-Update | |
At5g18620 | No alias | Chromatin-remodeling complex ATPase... | 0.02 | Orthogroups_2024-Update | |
Bradi1g10360 | No alias | chromatin remodeling 1 | 0.02 | Orthogroups_2024-Update | |
Bradi1g18910 | No alias | chromatin remodeling 5 | 0.03 | Orthogroups_2024-Update | |
Bradi1g26940 | No alias | chromatin remodeling 4 | 0.03 | Orthogroups_2024-Update | |
Bradi1g44177 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.06 | Orthogroups_2024-Update | |
Bradi2g12950 | No alias | chromatin-remodeling protein 11 | 0.03 | Orthogroups_2024-Update | |
Brara.J01708.1 | No alias | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | Orthogroups_2024-Update | |
GRMZM2G049168 | No alias | SNF2 domain-containing protein / helicase... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G316191 | No alias | chromatin remodeling 4 | 0.02 | Orthogroups_2024-Update | |
Glyma.02G281000 | No alias | chromatin remodeling 5 | 0.02 | Orthogroups_2024-Update | |
Glyma.04G062400 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.02 | Orthogroups_2024-Update | |
Glyma.06G063400 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.03 | Orthogroups_2024-Update | |
Glyma.15G097000 | No alias | chromatin remodeling factor17 | 0.04 | Orthogroups_2024-Update | |
Glyma.17G022300 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G022450.1 | No alias | component *(CHR5) of SAGA transcription co-activator... | 0.03 | Orthogroups_2024-Update | |
Kfl00590_0040 | kfl00590_0040_v1.1 | (at2g28290 : 922.0) Encodes a SWI2/SNF2-like protein in... | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g05780 | No alias | chromatin-remodeling complex ATPase chain, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10429361g0010 | No alias | (at2g13370 : 1371.0) chromatin remodeling 5 (CHR5);... | 0.02 | Orthogroups_2024-Update | |
Mp5g06580.2 | No alias | chromatin remodeling factor (Snf2) | 0.02 | Orthogroups_2024-Update | |
PSME_00001593-RA | No alias | (at2g13370 : 1311.0) chromatin remodeling 5 (CHR5);... | 0.03 | Orthogroups_2024-Update | |
PSME_00005765-RA | No alias | (q7g8y3|isw2_orysa : 1630.0) Probable chromatin... | 0.02 | Orthogroups_2024-Update | |
PSME_00009909-RA | No alias | (at2g25170 : 296.0) Encodes a SWI/SWF nuclear-localized... | 0.03 | Orthogroups_2024-Update | |
PSME_00015826-RA | No alias | (at3g06010 : 472.0) Encodes AtCHR12, a SNF2/Brahma-type... | 0.03 | Orthogroups_2024-Update | |
Potri.001G253400 | No alias | chromatin remodeling 5 | 0.03 | Orthogroups_2024-Update | |
Potri.009G047800 | No alias | chromatin remodeling 5 | 0.02 | Orthogroups_2024-Update | |
Potri.010G019150 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | Orthogroups_2024-Update | |
Potri.010G020700 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
Potri.010G091200 | No alias | Homeotic gene regulator | 0.02 | Orthogroups_2024-Update | |
Potri.014G056700 | No alias | SNF2 domain-containing protein / helicase... | 0.03 | Orthogroups_2024-Update | |
Potri.019G129900 | No alias | chromatin remodeling 1 | 0.02 | Orthogroups_2024-Update | |
Seita.6G108300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.010G105200.1 | No alias | SMARCA component *(SYD/BRM/MINU) | 0.02 | Orthogroups_2024-Update | |
Solyc02g062780 | No alias | chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1) | 0.02 | Orthogroups_2024-Update | |
Solyc02g068560 | No alias | CHD3-type chromatin-remodeling factor PICKLE (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen01g029280 | No alias | SNF2 family N-terminal domain | 0.02 | Orthogroups_2024-Update | |
Sopen02g017710 | No alias | SNF2 family N-terminal domain | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00000802.67 | No alias | (at3g06010 : 465.0) Encodes AtCHR12, a SNF2/Brahma-type... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006479 | protein methylation | IEP | Predicted GO |
BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016571 | histone methylation | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No external refs found! |