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  5. At5g05290

At5g05290


Description : Expansin-A2 [Source:UniProtKB/Swiss-Prot;Acc:Q38866]


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g05290
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
A4A49_20002 No alias expansin-a12 0.03 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.04 Orthogroups_2024-Update
Brara.B01279.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.C00061.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Brara.C02851.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.D00393.1 No alias alpha-class expansin 0.05 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.G02887.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Brara.I01201.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
GRMZM2G094523 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.04 Orthogroups_2024-Update
Glyma.06G195000 No alias expansin A15 0.03 Orthogroups_2024-Update
Glyma.15G037700 No alias expansin A4 0.04 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.04 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g51040 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g15840 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g19570 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g50400 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10377235g0010 No alias (at2g40610 : 412.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
MA_184474g0010 No alias (at2g40610 : 411.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
MA_792493g0010 No alias (at1g69530 : 351.0) Member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Mp1g24230.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Mp3g10160.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
PSME_00018430-RA No alias (at2g40610 : 404.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.001G112866 No alias expansin A18 0.03 Orthogroups_2024-Update
Potri.001G401700 No alias expansin 12 0.04 Orthogroups_2024-Update
Potri.016G098700 No alias Barwin-like endoglucanases superfamily protein 0.04 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s266_66V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s75_122V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.004G121700.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc05g007830 No alias expansin12 0.03 Orthogroups_2024-Update
Sopen02g032810 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 163 241
IPR009009 RlpA-like_DPBB 67 151
No external refs found!