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  5. Mp2g10240.1

Mp2g10240.1


Description : tyrosyl-DNA phosphodiesterase (TDP1)


Gene families : OG_42_0005469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g10240.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G045160.1 No alias tyrosyl-DNA phosphodiesterase *(TDP1) 0.03 Orthogroups_2024-Update
Seita.7G294600.1 No alias tyrosyl-DNA phosphodiesterase *(TDP1) 0.03 Orthogroups_2024-Update
Solyc03g031820 No alias tyrosyl-DNA phosphodiesterase-like protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA 16Dec
BP GO:0006281 DNA repair IEA 16Dec
MF GO:0008081 phosphoric diester hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010347 Tdp1 220 662
No external refs found!