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  5. Mp2g12330.1

Mp2g12330.1


Description : High mobility group B protein 6 OS=Arabidopsis thaliana (sp|q9sup7|hmgb6_arath : 166.0)


Gene families : OG_42_0004409 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g12330.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
73858 No alias HMG (high mobility group) box protein 0.06 Orthogroups_2024-Update
A4A49_04727 No alias high mobility group b protein 6 0.02 Orthogroups_2024-Update
At4g23800 No alias High mobility group B protein 6... 0.03 Orthogroups_2024-Update
Brara.A01385.1 No alias DNA bending architectural protein *(HMG-B) 0.08 Orthogroups_2024-Update
Brara.I02554.1 No alias DNA bending architectural protein *(HMG-B) 0.08 Orthogroups_2024-Update
Glyma.05G215500 No alias HMG (high mobility group) box protein 0.03 Orthogroups_2024-Update
Glyma.08G021700 No alias HMG (high mobility group) box protein 0.08 Orthogroups_2024-Update
Kfl00059_0200 kfl00059_0200_v1.... (at4g23800 : 191.0) HMG (high mobility group) box... 0.07 Orthogroups_2024-Update
PSME_00006829-RA No alias (at4g23800 : 271.0) HMG (high mobility group) box... 0.02 Orthogroups_2024-Update
Potri.001G093700 No alias HMG (high mobility group) box protein 0.03 Orthogroups_2024-Update
Pp1s2_357V6 No alias high mobility group family 0.02 Orthogroups_2024-Update
Solyc08g082070 No alias High mobility group family protein (AHRD V3.3 *** B9GL80_POPTR) 0.13 Orthogroups_2024-Update
Sopen08g030360 No alias HMG (high mobility group) box 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0003964 RNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 255 321
IPR009071 HMG_box_dom 382 450
IPR009071 HMG_box_dom 139 201
No external refs found!