Solyc03g114000


Description : Pollen-specific protein SF3, putative (AHRD V3.3 *** Q53J16_SOLLC)


Gene families : OG_42_0000555 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g114000
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bradi5g16666 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.I04216.1 No alias LIM-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00005847-RA No alias (at1g01780 : 120.0) GATA type zinc finger transcription... 0.02 Orthogroups_2024-Update
Sobic.004G303700.1 No alias LIM-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR001781 Znf_LIM 109 164
IPR001781 Znf_LIM 11 65
No external refs found!