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  5. Mp3g20600.1

Mp3g20600.1


Description : class II photolyase (PHR1)


Gene families : OG_42_0005942 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g20600.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Bradi3g22580 No alias photolyase 1 0.02 Orthogroups_2024-Update
GRMZM2G029519 No alias photolyase 1 0.02 Orthogroups_2024-Update
Glyma.11G029500 No alias photolyase 1 0.02 Orthogroups_2024-Update
Seita.9G281600.1 No alias class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 139 298
No external refs found!