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  5. Mp3g21700.1

Mp3g21700.1


Description : E2 ubiquitin conjugating protein (APC/C)


Gene families : OG_42_0004190 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp3g21700.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
A4A49_08218 No alias ubiquitin-conjugating enzyme e2 20 0.03 Orthogroups_2024-Update
At1g50490 No alias Ubiquitin-conjugating enzyme E2 20... 0.02 Orthogroups_2024-Update
Brara.F00307.1 No alias E2 ubiquitin-conjugating protein 0.04 Orthogroups_2024-Update
Glyma.11G095700 No alias ubiquitin-conjugating enzyme19 0.05 Orthogroups_2024-Update
Glyma.12G021800 No alias ubiquitin-conjugating enzyme19 0.05 Orthogroups_2024-Update
Kfl00002_0720 kfl00002_0720_v1.1 (at1g50490 : 218.0) Encodes one of two... 0.03 Orthogroups_2024-Update
Potri.001G254500 No alias ubiquitin-conjugating enzyme 20 0.03 Orthogroups_2024-Update
Solyc11g065190 No alias Ubiquitin-conjugating enzyme (AHRD V3.3 *** G7K9A0_MEDTR) 0.08 Orthogroups_2024-Update
Sopen11g024910 No alias Ubiquitin-conjugating enzyme 0.06 Orthogroups_2024-Update
evm.model.contig_4545.1 No alias (at1g50490 : 175.0) Encodes one of two... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0000818 nuclear MIS12/MIND complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0003964 RNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 48 178
No external refs found!