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  5. Mp5g06170.1

Mp5g06170.1


Description : component psRPL27 of large ribosomal subunit proteome


Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp5g06170.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
At2g16930 No alias 50S ribosomal protein L27 [Source:UniProtKB/TrEMBL;Acc:Q9ZVX0] 0.03 Orthogroups_2024-Update
Bradi2g59210 No alias ribosomal protein large subunit 27 0.02 Orthogroups_2024-Update
Cre06.g300800 No alias ribosomal protein large subunit 27 0.06 Orthogroups_2024-Update
HORVU3Hr1G095330.1 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
PSME_00044767-RA No alias (at5g15220 : 192.0) Ribosomal protein L27 family... 0.03 Orthogroups_2024-Update
Potri.001G329500 No alias ribosomal protein large subunit 27 0.04 Orthogroups_2024-Update
Pp1s19_202V6 No alias ribosomal protein l27 0.04 Orthogroups_2024-Update
Sobic.007G071300.1 No alias component *(bL27m) of large mitoribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Solyc11g068820 No alias 50S ribosomal protein L27 0.03 Orthogroups_2024-Update
evm.model.tig00021428.4 No alias (at2g16930 : 106.0) Ribosomal protein L27 family... 0.02 Orthogroups_2024-Update
evm.model.tig00022075.47 No alias (p30155|rk27_tobac : 110.0) 50S ribosomal protein L27,... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 57 136
No external refs found!