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  5. Mp6g14360.1

Mp6g14360.1


Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG_42_0002802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002802_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha: Mp6g14360.1
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G082200 No alias dehydroquinate dehydratase, putative / shikimate... 0.02 Orthogroups_2024-Update
Kfl00257_0140 kfl00257_0140_v1.1 (at3g06350 : 423.0) MATERNAL EFFECT EMBRYO ARREST 32... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA 16Dec
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA 16Dec
BP GO:0055114 oxidation-reduction process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
InterPro domains Description Start Stop
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 351 417
IPR001381 DHquinase_I 8 226
IPR013708 Shikimate_DH-bd_N 240 320
No external refs found!