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  5. At5g17290

At5g17290


Description : Autophagy protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI2]


Gene families : OG_42_0006677 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006677_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g17290
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Brara.B00703.1 No alias regulatory factor *(ATG5) of autophagosome 0.03 Orthogroups_2024-Update
Brara.J01820.1 No alias regulatory factor *(ATG5) of autophagosome 0.04 Orthogroups_2024-Update
Potri.017G139700 No alias autophagy protein Apg5 family 0.03 Orthogroups_2024-Update
Pp1s227_54V6 No alias autophagy protein 5 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA InterProScan predictions
BP GO:0006914 autophagy IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007239 Atg5 77 330
No external refs found!