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Description : E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At5g27420 | |
| Cluster | HCCA clusters: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_38307 | No alias | ring-h2 finger protein atl11 | 0.02 | Orthogroups_2024-Update | |
| At1g72200 | No alias | RING-H2 finger protein ATL11... | 0.03 | Orthogroups_2024-Update | |
| At2g34990 | No alias | RING/U-box superfamily protein [Source:TAIR;Acc:AT2G34990] | 0.03 | Orthogroups_2024-Update | |
| At2g35910 | No alias | RING-H2 finger protein ATL70... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g44733 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02910.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Brara.F02551.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G01336.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I02379.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G004519 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G460958 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G028280.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| HORVU3Hr1G028310.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g61470 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g09310 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_17390g0010 | No alias | (at3g61550 : 149.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_38494g0010 | No alias | (at1g49230 : 119.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_611616g0010 | No alias | (at1g49230 : 125.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_80729g0030 | No alias | (at3g16720 : 139.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003022-RA | No alias | (at1g72200 : 164.0) RING/U-box superfamily protein;... | 0.06 | Orthogroups_2024-Update | |
| PSME_00003023-RA | No alias | (at1g72200 : 141.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00034763-RA | No alias | (at5g05280 : 85.1) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00057213-RA | No alias | (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... | 0.04 | Orthogroups_2024-Update | |
| Pp1s20_280V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Pp1s41_270V6 | No alias | zinc finger (c3hc4-type ring finger) family protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G203900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Seita.5G023000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G005000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G109100.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G187600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G110400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sopen04g004890 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen08g025350 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_606.5 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000776 | kinetochore | IEP | Predicted GO |
| MF | GO:0003756 | protein disulfide isomerase activity | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009235 | cobalamin metabolic process | IEP | Predicted GO |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016852 | sirohydrochlorin cobaltochelatase activity | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| BP | GO:0034508 | centromere complex assembly | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 123 | 166 |
| No external refs found! |