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  5. At5g38510

At5g38510


Description : RHOMBOID-like protein 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FFX0]


Gene families : OG_42_0007191 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007191_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g38510
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Pp1s12_109V6 No alias rhomboid family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 228 366
No external refs found!