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  5. At5g43060

At5g43060


Description : Probable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g43060
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Bradi5g24027 No alias Granulin repeat cysteine protease family protein 0.04 Orthogroups_2024-Update
GRMZM2G150256 No alias Granulin repeat cysteine protease family protein 0.02 Orthogroups_2024-Update
Glyma.17G239000 No alias Granulin repeat cysteine protease family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G075530.1 No alias C1-class subclass XBCP3 cysteine protease & EC_3.4... 0.02 Orthogroups_2024-Update
Kfl00134_0060 kfl00134_0060_v1.1 (p25776|orya_orysa : 439.0) Oryzain alpha chain... 0.02 Orthogroups_2024-Update
PSME_00033017-RA No alias (at1g47128 : 547.0) cysteine proteinase precursor-like... 0.03 Orthogroups_2024-Update
Sopen02g037610 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update
Sopen04g032140 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update
Sopen04g036340 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update
Sopen12g031600 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008234 cysteine-type peptidase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0008156 negative regulation of DNA replication IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0048478 replication fork protection IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051053 negative regulation of DNA metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 50 110
IPR000668 Peptidase_C1A_C 138 353
IPR000118 Granulin 387 434
No external refs found!