At5g43270

Description : Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g43270
Cluster	HCCA clusters: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18444	No alias	squamosa promoter-binding-like protein 5	0.02	Orthogroups_2024-Update
Bradi1g26720	No alias	squamosa promoter binding protein-like 4	0.02	Orthogroups_2024-Update
Brara.A03153.1	No alias	SBP-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F03810.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G00853.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I01777.1	No alias	SBP-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I03021.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G101511	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.02	Orthogroups_2024-Update
Glyma.01G063700	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
Glyma.05G019000	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.04	Orthogroups_2024-Update
Glyma.07G109600	No alias	squamosa promoter binding protein-like 8	0.04	Orthogroups_2024-Update
Glyma.17G080700	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
Glyma.18G005600	No alias	squamosa promoter binding protein-like 2	0.03	Orthogroups_2024-Update
MA_20537g0010	No alias	(at1g02065 : 148.0) Encodes an SBP-box gene, a member of...	0.03	Orthogroups_2024-Update
Mp1g10020.1	No alias	transcription factor (SBP)	0.03	Orthogroups_2024-Update
Potri.001G055900	No alias	squamosa promoter binding protein-like 2	0.03	Orthogroups_2024-Update
Potri.004G046700	No alias	squamosa promoter binding protein-like 3	0.03	Orthogroups_2024-Update
Potri.008G097900	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.04	Orthogroups_2024-Update
Potri.014G057800	No alias	squamosa promoter binding protein-like 10	0.03	Orthogroups_2024-Update
Potri.019G073600	No alias	squamosa promoter binding protein-like 15	0.03	Orthogroups_2024-Update
Pp1s252_40V6	No alias	squamosa promoter-binding	0.03	Orthogroups_2024-Update
Pp1s313_76V6	No alias	squamosa promoter-binding	0.01	Orthogroups_2024-Update
Pp1s337_52V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Sobic.007G193500.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G254200.2	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g090730	No alias	Squamosa promoter binding protein 8b	0.03	Orthogroups_2024-Update
Solyc07g053810	No alias	Squamosa promoter binding protein 4	0.03	Orthogroups_2024-Update
Solyc12g038520	No alias	Squamosa promoter binding protein 6c	0.03	Orthogroups_2024-Update
Sopen10g029320	No alias	SBP domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006528	asparagine metabolic process	IEP	Predicted GO
BP	GO:0006529	asparagine biosynthetic process	IEP	Predicted GO
BP	GO:0006541	glutamine metabolic process	IEP	Predicted GO
BP	GO:0006542	glutamine biosynthetic process	IEP	Predicted GO
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0006606	protein import into nucleus	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
BP	GO:0008272	sulfate transport	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0008987	quinolinate synthetase A activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
BP	GO:0009108	coenzyme biosynthetic process	IEP	Predicted GO
BP	GO:0009435	NAD biosynthetic process	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015858	nucleoside transport	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0019674	NAD metabolic process	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
BP	GO:0034504	protein localization to nucleus	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051170	import into nucleus	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
BP	GO:0051188	cofactor biosynthetic process	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
MF	GO:0140104	molecular carrier activity	IEP	Predicted GO
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predicted GO
BP	GO:1901264	carbohydrate derivative transport	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1901642	nucleoside transmembrane transport	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	169	242

External Links

No external refs found!

At5g43270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation