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  5. At5g43870

At5g43870


Description : At5g43870 [Source:UniProtKB/TrEMBL;Acc:Q9LKC2]


Gene families : OG_42_0000755 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g43870
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
268691 No alias Plant protein of unknown function (DUF828) with plant... 0.02 Orthogroups_2024-Update
Bradi3g33300 No alias Plant protein of unknown function (DUF828) with plant... 0.01 Orthogroups_2024-Update
Bradi4g02467 No alias Plant protein of unknown function (DUF828) with plant... 0.02 Orthogroups_2024-Update
Brara.F03782.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G027000.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU0Hr1G032140.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g43510 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.003G077900 No alias Plant protein of unknown function (DUF828) with plant... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008546 DUF828 22 307
IPR013666 PH_pln 341 445
No external refs found!