Description : 60S ribosomal protein L7 (AHRD V3.3 *** B9GMC3_POPTR)
Gene families : OG_42_0001114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc03g117060 | |
Cluster | HCCA clusters: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
103994 | No alias | Ribosomal protein L30/L7 family protein | 0.03 | Orthogroups_2024-Update | |
A4A49_32887 | No alias | 60s ribosomal protein l7-1 | 0.03 | Orthogroups_2024-Update | |
At1g80750 | No alias | 60S ribosomal protein L7-1... | 0.03 | Orthogroups_2024-Update | |
Bradi1g04950 | No alias | Ribosomal protein L30/L7 family protein | 0.03 | Orthogroups_2024-Update | |
Bradi5g20900 | No alias | Ribosomal protein L30/L7 family protein | 0.05 | Orthogroups_2024-Update | |
Brara.B02397.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.B03026.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.D02679.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.F03496.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.I02011.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Cre12.g537800 | No alias | Ribosomal protein L30/L7 family protein | 0.06 | Orthogroups_2024-Update | |
GRMZM5G868433 | No alias | Ribosomal protein L30/L7 family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.07G020000 | No alias | Ribosomal protein L30/L7 family protein | 0.05 | Orthogroups_2024-Update | |
Glyma.15G167400 | No alias | Ribosomal protein L30/L7 family protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G100970.4 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G108990.2 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Kfl00380_0050 | kfl00380_0050_v1.1 | (at2g01250 : 349.0) Ribosomal protein L30/L7 family... | 0.02 | Orthogroups_2024-Update | |
LOC_Os04g51630 | No alias | 60S ribosomal protein L7, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_47548g0010 | No alias | (at2g01250 : 324.0) Ribosomal protein L30/L7 family... | 0.04 | Orthogroups_2024-Update | |
PSME_00040767-RA | No alias | (at2g01250 : 333.0) Ribosomal protein L30/L7 family... | 0.04 | Orthogroups_2024-Update | |
Potri.001G047400 | No alias | Ribosomal protein L30/L7 family protein | 0.03 | Orthogroups_2024-Update | |
Potri.006G073200 | No alias | Ribosomal protein L30/L7 family protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G008000 | No alias | Ribosomal protein L30/L7 family protein | 0.05 | Orthogroups_2024-Update | |
Potri.010G250900 | No alias | Ribosomal protein L30/L7 family protein | 0.04 | Orthogroups_2024-Update | |
Pp1s11_173V6 | No alias | 60s ribosomal protein l7-1 | 0.02 | Orthogroups_2024-Update | |
Pp1s243_40V6 | No alias | 60s ribosomal protein l7-2 | 0.04 | Orthogroups_2024-Update | |
Pp1s7_369V6 | No alias | 60s ribosomal protein l7-2 | 0.05 | Orthogroups_2024-Update | |
Seita.6G017200.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Seita.7G228400.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.007G085000.2 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.007G085001.1 | No alias | component *(uL30) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Solyc07g008370 | No alias | 60S ribosomal protein L7 (AHRD V3.3 *** A0A072VPV6_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Sopen03g035970 | No alias | Ribosomal protein L30p/L7e | 0.03 | Orthogroups_2024-Update | |
Sopen07g004260 | No alias | Ribosomal L30 N-terminal domain | 0.06 | Orthogroups_2024-Update | |
Sopen08g023720 | No alias | Ribosomal L30 N-terminal domain | 0.03 | Orthogroups_2024-Update | |
Sopen12g032080 | No alias | Ribosomal L30 N-terminal domain | 0.05 | Orthogroups_2024-Update | |
evm.model.contig_2085.3 | No alias | (at3g13580 : 237.0) Ribosomal protein L30/L7 family... | 0.07 | Orthogroups_2024-Update | |
evm.model.tig00020909.42 | No alias | (at2g44120 : 205.0) Ribosomal protein L30/L7 family... | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Predicted GO |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Predicted GO |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009112 | nucleobase metabolic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No external refs found! |