1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g46270

At5g46270


Description : Disease resistance protein (TIR-NBS-LRR class) family [Source:TAIR;Acc:AT5G46270]


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g46270
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
A4A49_22857 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
Brara.D01149.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.J01728.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G134400 No alias transmembrane receptors;ATP binding 0.02 Orthogroups_2024-Update
Glyma.10G184300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.12G132000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Sopen12g032720 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
CC GO:0070176 DRM complex IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
CC GO:0090568 nuclear transcriptional repressor complex IEP Predicted GO
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 208 438
IPR000157 TIR_dom 23 195
IPR011713 Leu-rich_rpt_3 616 634
No external refs found!