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  5. At5g53480

At5g53480


Description : Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]


Gene families : OG_42_0001757 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g53480
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Bradi4g00730 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
PSME_00010658-RA No alias (at5g53480 : 1164.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00036090-RA No alias (at5g53480 : 1155.0) ARM repeat superfamily protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
MF GO:0008536 Ran GTPase binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0035658 Mon1-Ccz1 complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 101
No external refs found!