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  5. At5g59750

At5g59750


Description : Monofunctional riboflavin biosynthesis protein RIBA 3 [Source:UniProtKB/TrEMBL;Acc:F4KJA1]


Gene families : OG_42_0001532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g59750
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Brara.B01074.1 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 Orthogroups_2024-Update
GRMZM2G105466 No alias GTP cyclohydrolase II 0.04 Orthogroups_2024-Update
Glyma.08G132700 No alias GTP cyclohydrolase II 0.05 Orthogroups_2024-Update
Glyma.13G332567 No alias DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II 0.04 Orthogroups_2024-Update
Glyma.13G332633 No alias DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II 0.03 Orthogroups_2024-Update
Glyma.15G041600 No alias DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II 0.03 Orthogroups_2024-Update
LOC_Os02g36340 No alias riboflavin biosynthesis protein ribAB, chloroplast... 0.03 Orthogroups_2024-Update
PSME_00041933-RA No alias (at5g64300 : 703.0) encodes GTP cyclohydrolase II that... 0.03 Orthogroups_2024-Update
Seita.1G204000.1 No alias bifunctional GTP cyclohydrolase II *(RibA) and DHBP... 0.02 Orthogroups_2024-Update
Solyc01g105560 No alias GTP cyclohydrolase II/3,4-dihydroxy-2-butanone... 0.04 Orthogroups_2024-Update
Sopen11g030800 No alias GTP cyclohydrolase II 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEA InterProScan predictions
BP GO:0009231 riboflavin biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000422 DHBP_synthase_RibB 107 299
IPR032677 GTP_cyclohydro_II 312 475
No external refs found!