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  5. At5g62430

At5g62430


Description : Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g62430
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
29617 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
89924 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.04 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.08 Orthogroups_2024-Update
AC155434.2_FG006 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.08 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.08 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.07 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.08 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.I03146.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G394941 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Glyma.02G108600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.04G168300 No alias cycling DOF factor 3 0.06 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.07 Orthogroups_2024-Update
Glyma.06G124300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.06 Orthogroups_2024-Update
Glyma.07G229600 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Glyma.09G237000 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Glyma.13G062500 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Glyma.13G241900 No alias Dof-type zinc finger DNA-binding family protein 0.06 Orthogroups_2024-Update
Glyma.15G044800 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.06 Orthogroups_2024-Update
Glyma.18G150800 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
HORVU2Hr1G095390.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU6Hr1G065250.4 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os10g35300 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.02 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.06 Orthogroups_2024-Update
Pp1s351_46V6 No alias zinc finger 0.05 Orthogroups_2024-Update
Pp1s37_7V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s69_113V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Seita.9G525000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Sobic.002G421900.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.003G121400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.05 Orthogroups_2024-Update
Solyc03g112930 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.02 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.05 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.05 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen02g032780 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen06g026650 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 52 108
No external refs found!