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  5. Solyc03g119080

Solyc03g119080


Description : beta-mannosidase enzyme


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g119080
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
268527 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
A4A49_02279 No alias beta-glucosidase 46 0.04 Orthogroups_2024-Update
A4A49_17396 No alias beta-glucosidase 44 0.03 Orthogroups_2024-Update
A4A49_20515 No alias beta-glucosidase 12 0.04 Orthogroups_2024-Update
AC155376.2_FG005 No alias beta glucosidase 42 0.02 Orthogroups_2024-Update
Cre03.g171050 No alias beta glucosidase 29 0.02 Orthogroups_2024-Update
Glyma.09G003200 No alias beta glucosidase 13 0.03 Orthogroups_2024-Update
LOC_Os08g39860 No alias Os8bglu27 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
LOC_Os10g17650 No alias Os10bglu34 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
MA_10431526g0010 No alias (at1g26560 : 474.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
MA_139193g0010 No alias (at1g02850 : 511.0) beta glucosidase 11 (BGLU11);... 0.03 Orthogroups_2024-Update
PSME_00015091-RA No alias (at2g44480 : 470.0) beta glucosidase 17 (BGLU17);... 0.02 Orthogroups_2024-Update
Pp1s114_133V6 No alias bgl06_orysj ame: full=beta-glucosidase 6 short=os3bglu6... 0.03 Orthogroups_2024-Update
Seita.7G164400.1 No alias coniferin beta-glucosidase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sopen01g033600 No alias Glycosyl hydrolase family 1 0.05 Orthogroups_2024-Update
Sopen03g037970 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 44 513
No external refs found!