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  5. Solyc03g119210

Solyc03g119210


Description : Lipid transfer protein (AHRD V3.3 *** S4TID2_GOSHI)


Gene families : OG_42_0000430 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g119210
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_14756 No alias non-specific lipid-transfer protein 2 0.02 Orthogroups_2024-Update
At5g38195 No alias At5g38195 [Source:UniProtKB/TrEMBL;Acc:Q29QA1] 0.04 Orthogroups_2024-Update
Brara.B02069.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01526.1 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU7Hr1G096040.4 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g49640 No alias LTPL149 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
LOC_Os10g36090 No alias LTPL156 - Protease inhibitor/seed storage/LTP family... 0.03 Orthogroups_2024-Update
LOC_Os10g36100 No alias LTPL157 - Protease inhibitor/seed storage/LTP family... 0.04 Orthogroups_2024-Update
Seita.5G278900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G200900.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 16 91
No external refs found!