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  5. At5g65230

At5g65230


Description : Transcription factor MYB53 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP2]


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g65230
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
At3g62610 No alias Transcription factor MYB11... 0.04 Orthogroups_2024-Update
At5g14340 No alias myb domain protein 40 [Source:TAIR;Acc:AT5G14340] 0.03 Orthogroups_2024-Update
At5g23000 No alias Transcription factor RAX1... 0.04 Orthogroups_2024-Update
Bradi1g61160 No alias myb domain protein 96 0.04 Orthogroups_2024-Update
Bradi2g24400 No alias myb domain protein 6 0.04 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Brara.B00599.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Brara.F00557.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Brara.H01064.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.04 Orthogroups_2024-Update
Glyma.01G222200 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.05G224300 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.07G008500 No alias myb domain protein 26 0.04 Orthogroups_2024-Update
Glyma.13G333200 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.15G259400 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.19G248100 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.20G032900 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
Glyma.20G082300 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU1Hr1G068520.6 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G092820.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.03 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
Solyc05g048830 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRS4_SALMI) 0.03 Orthogroups_2024-Update
Solyc07g053230 No alias R2R3MYB transcription factor 83 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!