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  5. Solyc03g120440

Solyc03g120440


Description : cyclin A2_1


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g120440
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.02 Orthogroups_2024-Update
97411 No alias Cyclin A1;1 0.02 Orthogroups_2024-Update
A4A49_20167 No alias cyclin-b2-4 0.03 Orthogroups_2024-Update
At2g26760 No alias CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5] 0.03 Orthogroups_2024-Update
At4g37490 No alias Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183] 0.03 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Brara.F01467.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Brara.H00423.1 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
Cre03.g207900 No alias Cyclin A2;4 0.03 Orthogroups_2024-Update
Glyma.01G159700 No alias Cyclin B2;3 0.06 Orthogroups_2024-Update
Glyma.02G277600 No alias Cyclin family protein 0.05 Orthogroups_2024-Update
Glyma.03G123600 No alias Cyclin family protein 0.04 Orthogroups_2024-Update
Glyma.04G001100 No alias Cyclin B2;3 0.04 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.06 Orthogroups_2024-Update
Glyma.04G071600 No alias mitotic-like cyclin 3B from Arabidopsis 0.03 Orthogroups_2024-Update
Glyma.04G246600 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Glyma.06G000600 No alias Cyclin B2;3 0.05 Orthogroups_2024-Update
Glyma.06G043900 No alias CYCLIN A3;4 0.04 Orthogroups_2024-Update
Glyma.06G072900 No alias mitotic-like cyclin 3B from Arabidopsis 0.06 Orthogroups_2024-Update
Glyma.06G116100 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Glyma.07G034100 No alias Cyclin A2;4 0.04 Orthogroups_2024-Update
Glyma.08G208000 No alias Cyclin A2;4 0.03 Orthogroups_2024-Update
Glyma.08G234900 No alias cyclin b3;1 0.04 Orthogroups_2024-Update
Glyma.11G084500 No alias Cyclin B2;3 0.03 Orthogroups_2024-Update
Glyma.13G031500 No alias Cyclin A1;1 0.07 Orthogroups_2024-Update
Glyma.14G037100 No alias Cyclin family protein 0.07 Orthogroups_2024-Update
Glyma.14G154200 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
Glyma.19G127200 No alias Cyclin family protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G013320.1 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
Kfl00560_0010 kfl00560_0010_v1.1 (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... 0.01 Orthogroups_2024-Update
LOC_Os01g59120 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.02 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.02 Orthogroups_2024-Update
Potri.001G177100 No alias Cyclin A2;4 0.03 Orthogroups_2024-Update
Sopen01g004530 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen02g012760 No alias Cyclin, C-terminal domain 0.03 Orthogroups_2024-Update
Sopen02g027620 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen03g039320 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen04g036020 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
Sopen06g024200 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
Sopen06g030020 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen10g028990 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
Sopen10g031460 No alias Cyclin, N-terminal domain 0.05 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.04 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.02 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 394 485
IPR006671 Cyclin_N 273 391
No external refs found!