Description : DNA demethylase 4
Gene families : OG_42_0001291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001291_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc03g123440 | |
Cluster | HCCA clusters: Cluster_266 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.03G190800 | No alias | HhH-GPD base excision DNA repair family protein | 0.03 | Orthogroups_2024-Update | |
Kfl00179_0260 | kfl00179_0260_v1.1 | (at3g10010 : 280.0) Encodes a protein with DNA... | 0.02 | Orthogroups_2024-Update | |
Sopen03g041220 | No alias | RRM in Demeter | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predicted GO |
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
CC | GO:0000922 | spindle pole | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
CC | GO:0005815 | microtubule organizing center | IEP | Predicted GO |
CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007020 | microtubule nucleation | IEP | Predicted GO |
MF | GO:0008378 | galactosyltransferase activity | IEP | Predicted GO |
BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Predicted GO |
BP | GO:0009245 | lipid A biosynthetic process | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015689 | molybdate ion transport | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
CC | GO:0030286 | dynein complex | IEP | Predicted GO |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046493 | lipid A metabolic process | IEP | Predicted GO |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR028925 | RRM_DME | 1428 | 1528 |
No external refs found! |