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  5. Solyc03g123890

Solyc03g123890


Description : Calcium-transporting ATPase (AHRD V3.3 *** A0A022PY01_ERYGU)


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g123890
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At4g29900 No alias Calcium-transporting ATPase 10, plasma membrane-type... 0.03 Orthogroups_2024-Update
Bradi2g60324 No alias autoinhibited Ca2+-ATPase 11 0.02 Orthogroups_2024-Update
Sobic.005G028400.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Sopen09g031720 No alias E1-E2 ATPase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0005516 calmodulin binding IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 864 1041
IPR008250 ATPase_P-typ_transduc_dom_A_sf 216 462
IPR024750 Ca_ATPase_N_dom 19 62
IPR004014 ATPase_P-typ_cation-transptr_N 129 196
No external refs found!