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  5. Solyc04g006940

Solyc04g006940


Description : Phospholipid-transporting ATPase (AHRD V3.3 *** M1CCQ9_SOLTU)


Gene families : OG_42_0000190 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g006940
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Bradi1g24630 No alias aminophospholipid ATPase 2 0.02 Orthogroups_2024-Update
GRMZM2G055209 No alias ATPase E1-E2 type family protein / haloacid... 0.03 Orthogroups_2024-Update
Glyma.04G166100 No alias ATPase E1-E2 type family protein / haloacid... 0.03 Orthogroups_2024-Update
Glyma.08G190400 No alias ATPase E1-E2 type family protein / haloacid... 0.04 Orthogroups_2024-Update
HORVU3Hr1G039540.1 No alias active component *(ALA) of ALA-ALIS flippase complex &... 0.08 Orthogroups_2024-Update
MA_10426287g0010 No alias (at1g17500 : 343.0) ATPase E1-E2 type family protein /... 0.03 Orthogroups_2024-Update
Potri.017G013500 No alias aminophospholipid ATPase 2 0.03 Orthogroups_2024-Update
Pp1s136_149V6 No alias aminophospholipid atpase 0.03 Orthogroups_2024-Update
Seita.6G128800.1 No alias active component *(ALA) of ALA-ALIS flippase complex &... 0.03 Orthogroups_2024-Update
Sobic.007G116500.1 No alias P4-type ATPase component *(ALA) of phospholipid flippase... 0.02 Orthogroups_2024-Update
Sopen01g007030 No alias E1-E2 ATPase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032631 P-type_ATPase_N 42 108
IPR008250 ATPase_P-typ_transduc_dom_A_sf 113 384
IPR032630 P_typ_ATPase_c 882 1132
No external refs found!