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  5. Solyc04g007280

Solyc04g007280


Description : Nuclear pore complex Nup98-Nup96 (AHRD V3.3 *** A0A0B0NW09_GOSAR)


Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc04g007280
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
At1g80680 No alias Nuclear pore complex protein NUP96... 0.02 Orthogroups_2024-Update
Brara.G02064.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.10G172002 No alias Nucleoporin autopeptidase 0.03 Orthogroups_2024-Update
Glyma.12G235000 No alias Nucleoporin autopeptidase 0.03 Orthogroups_2024-Update
Potri.011G148800 No alias Nucleoporin autopeptidase 0.04 Orthogroups_2024-Update
Sobic.006G126900.1 No alias nucleoporin of nuclear pore complex *(NUP98) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 835 975
No external refs found!