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  5. Solyc04g008680

Solyc04g008680


Description : DBC1/CARP1-like protein (AHRD V3.3 *** A0A103XRU5_CYNCS)


Gene families : OG_42_0005892 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g008680
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
PSME_00008699-RA No alias (at2g03150 : 236.0) embryo defective 1579 (emb1579);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 216 285
IPR025954 DBC1/CARP1_inactive_NUDIX_dom 718 834
IPR026992 DIOX_N 62 159
No external refs found!