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  5. Solyc04g011500

Solyc04g011500


Description : actin


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g011500
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
At5g09810 No alias AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4] 0.03 Orthogroups_2024-Update
Bradi4g41850 No alias actin 7 0.06 Orthogroups_2024-Update
Brara.D00512.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Glyma.02G172800 No alias actin 1 0.05 Orthogroups_2024-Update
Glyma.03G144800 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.06 Orthogroups_2024-Update
Glyma.09G111200 No alias actin 1 0.05 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.05 Orthogroups_2024-Update
HORVU5Hr1G039850.3 No alias actin filament protein 0.07 Orthogroups_2024-Update
LOC_Os10g36650 No alias actin, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00011258-RA No alias (o81221|act_goshi : 662.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
PSME_00049737-RA No alias (at5g09810 : 680.0) Member of Actin gene family.Mutants... 0.03 Orthogroups_2024-Update
Potri.001G309500 No alias actin 7 0.04 Orthogroups_2024-Update
Seita.8G043100.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Sobic.008G047000.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Sopen03g021220 No alias Actin 0.06 Orthogroups_2024-Update
Sopen04g005680 No alias Actin 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!