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  5. Solyc04g015290

Solyc04g015290


Description : Myb family transcription factor APL (AHRD V3.3 *** M5WGF6_PRUPE)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g015290
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_36129 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
At1g79430 No alias Myb family transcription factor APL... 0.03 Orthogroups_2024-Update
Bradi1g63690 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g36260 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G019260.2 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os06g40710 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
PSME_00036264-RA No alias (at5g29000 : 213.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_141V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s55_182V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.002G422000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sopen06g016880 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 44 95
IPR025756 Myb_CC_LHEQLE 140 185
No external refs found!