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  5. Solyc04g051350

Solyc04g051350


Description : Ribonucleoside-diphosphate reductase (AHRD V3.3 *** K4BS95_SOLLC)


Gene families : OG_42_0002341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g051350
Cluster HCCA clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Bradi1g48170 No alias ribonucleotide reductase 1 0.03 Orthogroups_2024-Update
Brara.F03660.1 No alias large subunit of ribonucleoside-diphosphate reductase... 0.04 Orthogroups_2024-Update
Glyma.05G186900 No alias ribonucleotide reductase 1 0.03 Orthogroups_2024-Update
Kfl00489_0040 kfl00489_0040_v1.1 (at2g21790 : 1267.0) encodes large subunit of... 0.01 Orthogroups_2024-Update
Sopen04g006180 No alias Ribonucleotide reductase, barrel domain 0.02 Orthogroups_2024-Update
evm.model.contig_2144.6 No alias (at2g21790 : 1100.0) encodes large subunit of... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006260 DNA replication IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0000922 spindle pole IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007020 microtubule nucleation IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000788 RNR_lg_C 216 757
IPR013509 RNR_lsu_N 142 212
IPR005144 ATP-cone_dom 1 89
No external refs found!