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  5. Solyc04g071140

Solyc04g071140


Description : Serine decarboxylase (AHRD V3.3 *** SDC1_ARATH)


Gene families : OG_42_0001375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g071140
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Brara.I01704.1 No alias serine decarboxylase 0.04 Orthogroups_2024-Update
LOC_Os04g04640 No alias decarboxylase, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g19300.1 No alias serine decarboxylase 0.02 Orthogroups_2024-Update
Sopen04g027090 No alias Pyridoxal-dependent decarboxylase conserved domain 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA InterProScan predictions
BP GO:0019752 carboxylic acid metabolic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 193 395
No external refs found!