1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00000053.13

evm.model.tig00000053.13


Description : (at2g16920 : 138.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)


Gene families : OG_42_0000441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000053.13
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
A4A49_21883 No alias putative ubiquitin-conjugating enzyme e2 26 0.03 Orthogroups_2024-Update
A4A49_36133 No alias putative ubiquitin-conjugating enzyme e2 25 0.02 Orthogroups_2024-Update
Bradi2g01840 No alias ubiquitin-conjugating enzyme 23 0.04 Orthogroups_2024-Update
Brara.E02604.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G078360 No alias ubiquitin-conjugating enzyme 23 0.02 Orthogroups_2024-Update
Glyma.12G224200 No alias ubiquitin-conjugating enzyme 25 0.02 Orthogroups_2024-Update
Seita.5G085400.1 No alias E2 ubiquitin-conjugating protein *(PHO2) 0.02 Orthogroups_2024-Update
Sobic.003G089000.1 No alias E2 ubiquitin-conjugating protein *(PHO2) 0.02 Orthogroups_2024-Update
Sobic.009G228000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 872 994
No external refs found!